EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS012-15589

Organism

Homo sapiens

Tissue/cell

Caco-2

Coordinate

chr19:41076640-41077340

Target genes

Number: 26
Name	Ensembl ID

MAP3K10	ENSG00000130758
TTC9B	ENSG00000174521
CNTD2	ENSG00000105219
AC118344.1	ENSG00000205041
MIR641	ENSG00000207631
AKT2	ENSG00000105221
C19orf47	ENSG00000160392
PLD3	ENSG00000105223
HIPK4	ENSG00000160396
PRX	ENSG00000105227
SERTAD1	ENSG00000197019
SERTAD3	ENSG00000167565
SHKBP1	ENSG00000160410
LTBP4	ENSG00000090006
NUMBL	ENSG00000105245
U6	ENSG00000223284
ADCK4	ENSG00000123815
ITPKC	ENSG00000086544
C19orf54	ENSG00000188493
SNRPA	ENSG00000077312
MIA	ENSG00000261857
RAB4B	ENSG00000167578
EGLN2	ENSG00000171570
CYP2T2P	ENSG00000233622
CYP2F1P	ENSG00000237118
CYP2A6	ENSG00000255974

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr19:41076734-41076753	CCTCCAGCAGGTGGCGGTA	+	7.09
SP1	MA0079.4	chr19:41076641-41076656	TGTGGGCGGGGCTTT	-	6.52
SP2	MA0516.2	chr19:41076640-41076657	GTGTGGGCGGGGCTTTG	-	6.82

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_54241

chr19:41076025-41077394

Spleen

Enhancer Sequence

GTGTGGGCGG GGCTTTGGAA GGCGGGTCTC AGGCTCAGGG TGACCATTGC GTGGAGCGGT 60
GGGACTGAGG AGGGGGTGTG GCTCAACTTC AGGCCCTCCA GCAGGTGGCG GTAGTAGGTG 120
GGGCCAGAGC TGGGGGGTGG TGGTGGCTTA AATCAAGAAA GCCAACCAAT GAGCAGGAGG 180
GGGTGTGGTT TAACGTCAGG CCCTCCAACC CGTGGGGGTA GTAGGTGGGG CCAGATGAGG 240
GGTGGGGCTC AACTTTGATG ATTCCAACCA ATGAACAGGA AGGGGCAGGA CCTAAGGTTA 300
GTGCATCTAA TGGATGATGG GTAGAGCTTA GGTGGGAACA GAAGGAAAAT GTTCTGAAAG 360
TGAGTAAATT GGAACCTAAC CTCTTAGCAA CCAACCCAGG AGTTGATCAG CTAAATAGCA 420
AAGAGGGAGG CATCTAGTTG AGAAGGTTTC AATGGCTTGT CGTGGAGCTT GGAGAGGTCA 480
CTCAACCAAT GAGTGGGGTG GGTCTACCCT TGAAGTTTCA AATTGGGGGA GGGTCCGAAA 540
ACGGGCAGAG CCCAAACTAA TGAGGGTAGG GGTTGGGAAG GGGGAGTCAT CTCTTACAGG 600
TTTCCAAATG AGGGTCTAGC CATGATGTGC CTGCTCTTGG GGAGTCCAGC TCCTGCTTGT 660
CCACCCTCTT TTTGTCCAAC TGAGAGGCAG AATCTGGGGA 700