| Tag | Content |
|---|
EnhancerAtlas ID | HS012-15575 |
Organism | Homo sapiens |
Tissue/cell | Caco-2 |
Coordinate | chr19:39634310-39636250 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| HNF4G | MA0484.1 | chr19:39634848-39634863 | TGGACTTTGGTCCTG | - | 6.24 | | TFAP2C | MA0524.2 | chr19:39635156-39635168 | TGCCCCAGGGCA | - | 6.44 | | TFAP2C | MA0524.2 | chr19:39635156-39635168 | TGCCCCAGGGCA | + | 7.22 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_05698 | chr19:39634397-39638545 | Brain_Cingulate_Gyrus | | SE_08672 | chr19:39634442-39638593 | Brain_Inferior_Temporal_Lobe | | SE_23718 | chr19:39634812-39637142 | Colon_Crypt_1 | | SE_24461 | chr19:39634819-39637100 | Colon_Crypt_2 | | SE_27062 | chr19:39634800-39636948 | Esophagus | | SE_31899 | chr19:39634712-39637534 | Gastric | | SE_41568 | chr19:39634672-39637106 | LNCaP | | SE_42792 | chr19:39634588-39637201 | Lung | | SE_47607 | chr19:39634817-39635469 | Pancreas | | SE_47607 | chr19:39635635-39636722 | Pancreas | | SE_68806 | chr19:39634672-39636439 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I039143 | chr19 | 39634525 | 39638049 |
|
Enhancer Sequence | CAGTGGCTCA CATCCCAGCA CTCTGGGAGG CTGAGGTGGG CAGATCACTT GAGCCCAGGA 60
GTTTGAGACC AGCCTGGGCT ATAGTGAGAC CTCTGCTCTA CAAAACATTT TTAAAATTAT 120
TGTTTTAAAA TAATTTAAAA ATTATTTAAA ATGTAAAAGG GCGTGGTGGC ATGTGCCTGT 180
GGTCCTAGCT ACTCAGGAGG CTGAGGTGGG AGGATTGCTT GAGCCCAGGA GTTGGAGGCT 240
GCAGTGAGCT ATGATGGGGT CCTAGCTACT CAGGAGGCTG AGGTGGGAGG ATTGCTTGAG 300
CCCAGGAGTT GGAGGCTGCA GTGAGCTCTG ATTGCACCAC TACACTCCAG CCTGGGTGAC 360
AGAGCAAAAC CTATGATGAT AGATAGATAG ATAGATAAGA TAGAGCGAGC AAGACCCTAT 420
CTCAGGTAGA TAGATAGATA GATAGATAGA CAGACAGACA GACAGACAGA CAGATAGATA 480
GATAGATAGA TTAGATTAGA TAGATAGATA GATAGATAGA TAGATATGGT TAAGTGAGTG 540
GACTTTGGTC CTGGTCAGAC TTGCCACGGA ATCCCAGTTC TGATACACTC GCCGTGTGAC 600
TGAGGGCTGA CATGTCTTCT CTCTGAGCTT CACTCTCCTG CTTCACACAC CGTGTGAACG 660
GCACCCTCCT CGCTGCCTTC TTTTGCACCA GGATGGAGCC TGCACGTAAC ACTTTGTAGT 720
GGTCTCACTG CTGTCCTGTC TCCAGCACGG GGCACCGATG AGCCAGCCAG AAGCCGTCCC 780
TGCCGGGGGG ATGCTTGACC CAAATCTTCA GTAATAACTC CTTCCACTCT GGGTGACCAG 840
CTGTGGTGCC CCAGGGCAGG GACTTGTTGA TCTGGGTTTG TTCTGGAGGC CAGAAGGGTT 900
TCCTGGGGAC TGGGATTGGA GCAGGATTGA GAGTGCCTGG TATGTGGAGA GACCTGGCTG 960
TTGTGGCATG AGTCCGAGGG CTCAGGGGCC GGCTGCTTCC CGGCCTTTGT CTTCCTTGCA 1020
GGAAACAGGC CAGGAGTTAC AAGGGGCCAG AGGATGCTGC TGTGGTTATG GTGGAAGTTA 1080
ACAGCTTTGG GAAGTGTGCA TGTGTGTGAG TGTGTGTGTG TGTGCACTTG TGCTCATTGT 1140
AAAGAGAGAC GGTAAAGAAA TGAGGAGAGA CTGCAGGCAC ATGCAAATAC AGAGAAAGCT 1200
TTCAGTTGTC AGGATCGCTC TCCCGGTTTT TCCTGCATGG TGGTGTAAAA TCTGACATGT 1260
GTACAGAAAA GTGTGTAAAA CCTCCATGTT CAGTTTAATG AATAATTATA AAGCAAACAG 1320
CCATGAAACT ACCACCCAGA TCAAGAAGAC AGGCATCACC AGCTCCCTGA AAGCCCTCTC 1380
CTTCACCTGC CCTTCCCAGT GCTAACAAAA ACATTCTCCT CCCTTTCTTT TCATTGTTCC 1440
TCTTTTTTGG TGAATTGTGA AAGATTTCAG ACACCCCCAA GAGAAGAGAG AATCACCTGC 1500
TGACCACCCT CAGGCCCGCT GCCCAGCTAA AAGACGAAAT GCTTGCTGTG GGTGCAGCCC 1560
CCAGGTGCCT CCCCCAGGGC CCCAGGCGTC GCTGGCCCTG CGTCTGCTTC CCTAAACAGT 1620
GTCCCGCATT GTTCTGCAGG ATTTTAAACT GCGTGTAAAT GGTACGAGGC CAGCGGCACT 1680
TGGCTGCAAC TCTCTCAATA TTTTGTTCTT GAGATTTCTC TGGGTGGAGT AATGAAGCTC 1740
TGTGCCAGAA GGAATGGTTC CCAGCGGGGG TCAGGGCACC CCTACCCCTG GCCAGAGGAA 1800
AGCAGCTCTG TCCTGGGGGG GCCCCAGGAG GACGCTCTGG GCTCCTCTCA CCCAGGCCCG 1860
CAGCCCCCTG CTCCACGTGG GTTTGAGGCG GCCACCTCCA GTGGAAGTGG TAGAGCGCCG 1920
TTGGCTTCCT AGGGCACCAC 1940
|
