| Tag | Content |
|---|
EnhancerAtlas ID | HS012-15512 |
Organism | Homo sapiens |
Tissue/cell | Caco-2 |
Coordinate | chr19:33531670-33532970 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| FOXP2 | MA0593.1 | chr19:33532688-33532699 | TTTGTTTACTT | - | 6.62 | | Foxd3 | MA0041.1 | chr19:33531867-33531879 | AAACAAACAAAC | - | 6.32 | | HES2 | MA0616.2 | chr19:33532960-33532970 | GGCACGTGCC | + | 6.02 | | HES2 | MA0616.2 | chr19:33532960-33532970 | GGCACGTGCC | - | 6.02 | | RREB1 | MA0073.1 | chr19:33532089-33532109 | CCTCCAAACATCCCCCACCC | + | 6.14 |
|
| | Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
| SE_23354 | chr19:33531310-33533037 | Colon_Crypt_1 | | SE_24632 | chr19:33531833-33532986 | Colon_Crypt_2 | | SE_24867 | chr19:33531356-33533794 | Colon_Crypt_3 | | SE_27867 | chr19:33529698-33533862 | Fetal_Intestine | | SE_28788 | chr19:33529691-33534092 | Fetal_Intestine_Large | | SE_32296 | chr19:33531754-33533737 | Gastric | | SE_33901 | chr19:33530645-33533837 | HCC1954 | | SE_35571 | chr19:33529621-33533888 | HepG2 | | SE_42005 | chr19:33532234-33532844 | LNCaP | | SE_47226 | chr19:33529418-33544806 | Panc1 | | SE_50977 | chr19:33531317-33533825 | Sigmoid_Colon | | SE_52660 | chr19:33530653-33533813 | Small_Intestine | | SE_56754 | chr19:33531354-33532337 | VACO_400 | | SE_56754 | chr19:33532345-33533023 | VACO_400 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr19 | 33532238 | 33532582 | | chr19 | 33531845 | 33532952 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I033039 | chr19 | 33529636 | 33535923 |
|
Enhancer Sequence | GCCAACACCG TGAAACCCTG TCTTACTAAA AGTATAAAAT TTAGCCAGGC ATGGTGGCAC 60
ATGCCTATAA TCCCAGCTAC TCGGGAGGCT GAGGCACAAG AATCACTTGA ATCCAGGAGG 120
TGGAGGTTGC GCAGGTGAGC TGGTATCTCG ACACTGCACT CCATCCTGGG AGACAGAATG 180
AGACTCTGTC TCAAAAAAAA CAAACAAACC TGAAAAAAGT GCATTTGAAA TATTTGATGG 240
CTTCCTAAAA AAACTCCAGG AAGCTCATGG ACTCCCAGCT GGAATGGATC AGAGAAGGGG 300
AAGACTTTGA AGGATCATAA AATCTGGTTT TTCAAGTGCC TGCCTAGCCA CGATACCCTC 360
TGACAGTCCT CAGATAAGGG CTTAGCACCC CCATTTCCAT TCCTGCATTT CTGGGGACAC 420
CTCCAAACAT CCCCCACCCC TATTCCAACA GATCTACTTT CCTTTGGGGG CTGCGGTAGG 480
AAACCTGGGA ACCAGAAGAC AAACAGAAGG AAAGCAGGGC CTAATTTACA ACTGAAACCA 540
CCCATGGCCT GCAGAGACAG CCACGTAATG GGTCGCCCAG GGACACTGAG GGGCCAGAGC 600
GGAGCTTGGC AAAATGCCCT ATTTGTTTTC GGGAAACCGT TGGTGCTTGT TGAGTCAGAT 660
TAATAAATAC CTTCAGGGTT TCCTCTGACA ACATTCTCCA GCAAGGGGTA CTTTGAACCT 720
TTAGGCCACT GTGAGAATCA TTAACAACCC CCCACTCCTG CCCCTGCCAA CCCAACCACT 780
GCCAGTTTAA CAATGAGCTT GAGTCAGGCT CGGGCCTCAG AAAGGGTGAC TGCTGTTGTC 840
GTTAAGAGAA CAAGGCACAC AAAACTGCCC TAGTTCCTGC CTGAGAAAGT CCAAGTTCCC 900
TGCTCACAGG GGCCTCTCTG ACCACCCTCT GTCTCTAAGG CTGGCCATCC TGGGCCAACC 960
TCTATGATAT TCAGAGTTCA TTATTCCCTA GAAAACATCA CTTCCCTAGG TGATCTGATT 1020
TGTTTACTTG TCTATAAAAG TCTCCTCCCA TCCTCCAACA AGAGAAATCA CAAAAGCAGA 1080
GCCTCGCCTG ATCTTCAGGC ACCTCAACTG TGCCTGCCAC TTAACAGGTG CTCAATAGCC 1140
AGGCACAGGG GCTCACTCCT GAAATCCCAG CACTCTGGGA GGCTGAGGCA GGAGGATCAC 1200
TTGAGGCCAA GACTTTGAGA CAAGCCTGTG CAACACGGTG AAACCCTGTC TCTACTAAAA 1260
CTTTAAAAAA TTCAATTAGC CAGGTGTGCT GGCACGTGCC 1300
|
