Tag | Content |
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EnhancerAtlas ID | HS012-15317 |
Organism | Homo sapiens |
Tissue/cell | Caco-2 |
Coordinate | chr19:1856180-1857980 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr19:1856368-1856386 | TCATCCTTCCTCCCTGCC | - | 6.08 | KLF5 | MA0599.1 | chr19:1857129-1857139 | GCCCCGCCCC | + | 6.02 | SPIB | MA0081.2 | chr19:1856870-1856882 | CACTTCCCCTTT | - | 6.07 | ZNF263 | MA0528.1 | chr19:1856360-1856381 | TTCTCATCTCATCCTTCCTCC | - | 6.11 | ZNF740 | MA0753.2 | chr19:1856952-1856965 | GTGGGGGGGGCGA | - | 7.04 |
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| Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
SE_05653 | chr19:1854545-1857986 | Brain_Cingulate_Gyrus | SE_12493 | chr19:1856309-1856716 | CD34_adult | SE_12794 | chr19:1855785-1856406 | CD34_fetal | SE_12794 | chr19:1856478-1856737 | CD34_fetal | SE_15325 | chr19:1851179-1863643 | CD4_Memory_Primary_7pool | SE_17066 | chr19:1855162-1858408 | CD4p_CD225int_CD127p_Tmem | SE_18006 | chr19:1854567-1858438 | CD4p_CD25-_CD45ROp_Memory | SE_20207 | chr19:1854775-1857036 | CD56 | SE_20207 | chr19:1857073-1858104 | CD56 | SE_20804 | chr19:1851994-1859364 | CD8_Memory_7pool | SE_22514 | chr19:1854652-1858255 | CD8_primiary | SE_23274 | chr19:1855536-1863748 | Colon_Crypt_1 | SE_23831 | chr19:1855456-1863700 | Colon_Crypt_2 | SE_24756 | chr19:1851482-1865735 | Colon_Crypt_3 | SE_27152 | chr19:1853176-1865991 | Esophagus | SE_34338 | chr19:1852133-1866086 | HCT-116 | SE_41602 | chr19:1854125-1856964 | LNCaP | SE_41602 | chr19:1857007-1862712 | LNCaP | SE_45211 | chr19:1855501-1858228 | NHLF | SE_50407 | chr19:1852750-1865843 | Sigmoid_Colon | SE_52963 | chr19:1854521-1862878 | Small_Intestine | SE_53592 | chr19:1853107-1866012 | Spleen | SE_57652 | chr19:1857385-1857987 | VACO_503 | SE_61842 | chr19:1851542-1865663 | Toledo | SE_68584 | chr19:1847293-1885536 | TC71 | SE_68585 | chr19:1847293-1885536 | TC71 | SE_68586 | chr19:1847293-1885536 | TC71 | SE_68587 | chr19:1847293-1885536 | TC71 | SE_69023 | chr19:1852746-1858528 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | GAGACGGCGG GAGGGGCACG GCCATGCTCA GGGTGACCGA GTGACATCTC TGCTCTAAGA 60 TCAGGGGCTG CCCTGGGGAG CCCAGCTGAG GAGGGGCACG GGAGGGTGGA GGGGTCTGCC 120 CACTGAGGGG CACCAGCGAT CACCCGTGAC CCAAGAAGAG CTGGAAGAAA AAACCTTCCC 180 TTCTCATCTC ATCCTTCCTC CCTGCCACAC CCCGACACCC TCAGCAAAAC AAGACTGCAG 240 ACAGAGACCA GCAGCCCCCC TCCCCAAGAG GTTGTGAATC CAGGCAGCTG GAGAGGGGGA 300 GAGACCAGCT GTCACCAAGA CCAACAGTAG CCTCAAATCC CTGGGGCTGC CTGCTCCACA 360 CCCCAAGTCT CCCCCAAGCA ACCCAGGATG CAGCTGGGGT CGCGGGTCCG CCCCAGCTGG 420 GGGCCGTCTA CAACCCAAGC AAGAGGCGCA GAGCAGCCCT GGAAGGGACC CCACTCCCAT 480 CTCAACCACT GGGCCCTGAC AGCTCCCAAG GGCCTCAGTC TGGGGACGGG GTCTGGCTGT 540 GGGAGCGCGG CTGGAGCAGA CCACGGGATT GGGGCTCGCG CCCCTCCAGG GAACATGCCG 600 CCGTGTCGCC ATCTTGCAAG GCACAGGCGG GGAGGCGGCA GGAGGGAAGG GGGAACATCC 660 CACGGCTGGG TGCCGGACAG TCAGTTGGTT CACTTCCCCT TTCAGGGCGG CGGGGCTGGT 720 CTCCACTCCC TCTCCCCCAG TTCCACTTTG CAAGGAGGAG CAGGTTGCCG GGGTGGGGGG 780 GGCGACCGGG GCAGGGGCGC GCAGCCGCTG GGAACACAGC TGCCGCACGT AGCTCGGCGG 840 CGGCGGCGGG GACATCCGCA GCCCCAGCCG GCCCCGCTCA CGTGGTCCCA CTCCCGCCGG 900 GGCCAGGGGG CCCGGGCCAG GGTCGCCTCT CCGGCCTGGG TGCCTGCCAG CCCCGCCCCG 960 CGCTTGGAGA CTGAGGCGCG CACATGCGCA CGTGGGTGGC GGGGCAGGGG GTGCACGGGC 1020 TACCCACCCA CGCTGCGCTG GGCGAAGCGC CTCTGCGAAA TGCCAGGCCC TGCCTCGCAC 1080 ACAATCCACT CGCAGGGAGG AGGGTGGGGT GAACTTGTGG GGGCCCAGAG CGCGCTGCTC 1140 CTAGCCAGCC GGGCCCCCAG GTGCACAGCC ACCCAGCTGC TCCGCGCTAC CTGGCCGAGA 1200 CGCAGCGCCC TGAGGATGCG GTGGGTGGGG ACAACGCGGG AGGGCAGTGT GGGCGGGGCC 1260 GCGGTGGACT TGACCCTCTG ACTCAGGCTG GGCCCGGGTG AGCTCAGGAC AGCCTCGGAA 1320 ACAGGCAGGC TCAGAAAAAT GGAGTCCAGG AAGTCCTGGA AACCTGGCCC GGCCCCGTCT 1380 GAGCCGGCAC AGGAGGGGCC TGGAGACAGG ACTGCGGGAC TGTGCCAAGG GCCCTGGTTC 1440 CGACAGGGAA GCCTCACCTC CTGAGCTTGT CTGGGGGGCC TTGGGGTGGG GAGGGGGGCT 1500 GTGGCCGGCT GCCTGCCGGG GCACTCACGT CCACCTAACA GGTGGGGTCG GGTCTGTAGG 1560 GGAGGGCACA GGTGGGGAAG ACCAGCCCCA GCCGCAAAGC AAGCATCCCA GGAGAGCCAG 1620 GAAAGGCTGG GGCTGGGGAG GCCTCTTACC CACCCAGGGA AGGGAGGAGC TCCTGAAGGT 1680 GATCCTTGAG CAGGTTCTAT AGAACCTATA GGCAGCTGCT TCTGGGAGCC GCTGCAGAAA 1740 AGGGGGAACA CTGGTGGTGA GGCCCTGCCA GCCTGGGGGT GGGGTCTCGA ATACTACTGG 1800
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