EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS012-14492

Organism

Homo sapiens

Tissue/cell

Caco-2

Coordinate

chr17:26851990-26853210

Target genes

Number: 38
Name	Ensembl ID

RP11	ENSG00000240873
AC100852.1	ENSG00000203483
AC061975.8	ENSG00000203482
PYY2	ENSG00000237575
TMEM97	ENSG00000109084
IFT20	ENSG00000109083
TNFAIP1	ENSG00000109079
POLDIP2	ENSG00000004142
TMEM199	ENSG00000244045
CTB	ENSG00000258924
SARM1	ENSG00000004139
SEBOX	ENSG00000109072
VTN	ENSG00000255604
SLC46A1	ENSG00000076351
RPS7P1	ENSG00000183405
SLC13A2	ENSG00000007216
FOXN1	ENSG00000109101
UNC119	ENSG00000109103
PIGS	ENSG00000087111
ALDOC	ENSG00000109107
SPAG5	ENSG00000227543
AC005726.6	ENSG00000167524
KIAA0100	ENSG00000007202
SDF2	ENSG00000132581
SUPT6H	ENSG00000109111
PROCA1	ENSG00000167525
RAB34	ENSG00000109113
RPL23A	ENSG00000198242
SNORD42B	ENSG00000238423
SNORD4A	ENSG00000238578
SNORD42A	ENSG00000238649
SNORD4B	ENSG00000238597
TLCD1	ENSG00000160606
NEK8	ENSG00000160602
TRAF4	ENSG00000076604
C17orf63	ENSG00000173065
ERAL1	ENSG00000132591
DHRS13	ENSG00000167536

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR1	MA0112.3	chr17:26852581-26852598	AAGGTCAACATTACCTG	+	6.27
POU2F2	MA0507.1	chr17:26852299-26852312	ATATGCAAATGTG	-	6.64
RREB1	MA0073.1	chr17:26852775-26852795	CCCCAAGCCACCCCAACAAA	+	6.16
SP4	MA0685.1	chr17:26852690-26852707	TGAGTGGGCGTAGCCTC	-	6.01

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_27527

chr17:26851340-26856293

Esophagus

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH17I028524

chr17

26851420

26853615

Enhancer Sequence

TACTAGTGGC CAGCGAGTGT CCCATCTTCC CACTGTCCCA GTTCCTAGCA GCCTAGAAAG 60
AGTCAGACCT CTGAGACCAA AGTCCCACCT TCTCTTTGCA GACCTTGCCA CTCAAGACCA 120
GAGAGTTGGG GCCTCCTGGT CAGCTGGGGA GGGGTGTTGG CCTGGCCAGC ATGGAGGGGG 180
GCAAGTGGGG GAGGTAGGCC AGGCTAAAGA AGCTGGCAGC TTCCCAGAGG CTCCTGAGTC 240
AGGATTCCAG TGTGTGACTT CTCACTGTTT GTTTAAATGT CCAGAAACTC CAGCCAGACC 300
TACACACCCA TATGCAAATG TGACAAGAAA AACACATTCC AGAGGCCAAG GGAAAGGGTT 360
TGGGGAGGAG CCATAGTACA CAGTTTTTCC CTCCCCAGCC TTAGCATACA GAGTTGAGAG 420
AGGACTTTAA GTGTGGAGGG ACCCTTCCTG GCCCCATTCT TTGCCCAGAG TGGGGCCTGG 480
GTGTATTCCT GGAAATACCT TGGAAGGTTA ACATGTCCTT CCATAGCCTG ACCTCCATAA 540
GCGGCGTGAC CCTGGACAAG TCTTAACGTC TCTGAGCCTC ATCTGAAAAG TAAGGTCAAC 600
ATTACCTGTC TCATGGGATT GTTGCTTAGG GAAGATAAAA GCTAAAGGGA ATTTGCTCCC 660
TGCTCCCCCG CTCTGGTTTG GAGGTCCCTG AGGCAGTGAC TGAGTGGGCG TAGCCTCAGC 720
AGTGCCTACT CCACATGCCC ACCAGCCCCC CTCACCTCTT GCTTTCAAAC AGGCCCCCAT 780
TCCAGCCCCA AGCCACCCCA ACAAAGGCTT AGAAGGAAGA TGGAGAAGGC GGTTGGGTCC 840
TACCAGGTGT GGCCAAAACA GGACTTTATT CTGGCCCTTT GACCACTTCT TCTCAGGCCC 900
CTTAAACATG ACCACAGCCT ACAGATAGGG CACCATCATC TCAGCTACTG CCCCCAAACC 960
TCCACTCAAT AACAGCTGCC AATCATTCTG CCAGGTGCTT TCTTTCAAGT GCCCCCATTT 1020
AATCCCCTCA ACAACACTCT AGAGAGTTCC CACCATACCC GTGTTGCAGA TGAGGAAACT 1080
GAGGCTCATA GAGGCCAAGT GACTTGCCCA GGGTGTCTCC TAACCTGCAA ATGGTGAGGC 1140
TGAGATTGAG TTCACACCCT TGCCCTCCCA CACATGGAGA AGAGCTCCAG AGACACACAG 1200
GTATCTGGTC GACTTGCTGG 1220