EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS012-12210 
Organism
Homo sapiens 
Tissue/cell
Caco-2 
Coordinate
chr12:125388920-125389850 
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
JUNMA0488.1chr12:125388968-125388981ATGATGATGTCAT+7.52
JUND(var.2)MA0492.1chr12:125388967-125388982TATGATGATGTCATC+7.95
NR2C2MA0504.1chr12:125389268-125389283AGATGTCAGAGGTCA+6.5
NR2F1MA0017.2chr12:125389274-125389287CAGAGGTCATGGG+6.22
Number of super-enhancer constituents: 49             
IDCoordinateTissue/cell
SE_00230chr12:125388338-125390251Adipose_Nuclei
SE_01093chr12:125388919-125390122Adrenal_Gland
SE_02134chr12:125388897-125389573Aorta
SE_03321chr12:125388972-125389652Brain_Angular_Gyrus
SE_04055chr12:125388824-125389967Brain_Anterior_Caudate
SE_05165chr12:125388544-125390177Brain_Cingulate_Gyrus
SE_06190chr12:125388553-125390227Brain_Hippocampus_Middle
SE_06843chr12:125388893-125389997Brain_Hippocampus_Middle_150
SE_08021chr12:125388566-125390207Brain_Inferior_Temporal_Lobe
SE_09364chr12:125388598-125389846CD14
SE_13397chr12:125388872-125390080CD34_Primary_RO01536
SE_14431chr12:125388878-125390194CD4_Memory_Primary_7pool
SE_20773chr12:125388894-125390071CD8_Memory_7pool
SE_23158chr12:125388934-125389702Colon_Crypt_1
SE_23827chr12:125389232-125389576Colon_Crypt_2
SE_25834chr12:125388864-125389970Duodenum_Smooth_Muscle
SE_26681chr12:125388907-125389569Esophagus
SE_27703chr12:125388877-125389964Fetal_Intestine
SE_28633chr12:125388803-125389938Fetal_Intestine_Large
SE_29734chr12:125388906-125389466Fetal_Muscle
SE_31649chr12:125388881-125389600Gastric
SE_34384chr12:125388875-125389982HCT-116
SE_34668chr12:125388535-125389975HeLa
SE_35334chr12:125388863-125389956HepG2
SE_35911chr12:125388867-125390037HMEC
SE_37255chr12:125388735-125390213HSMMtube
SE_39917chr12:125388941-125389977K562
SE_40930chr12:125388918-125389785Left_Ventricle
SE_42024chr12:125389206-125389610LNCaP
SE_42298chr12:125388901-125389697Lung
SE_44403chr12:125388797-125390012NHDF-Ad
SE_44876chr12:125388857-125390115NHLF
SE_46113chr12:125388854-125390112Osteoblasts
SE_47332chr12:125388099-125390028Panc1
SE_48238chr12:125388871-125390107Psoas_Muscle
SE_48805chr12:125388875-125389970Right_Atrium
SE_50218chr12:125388879-125389757Sigmoid_Colon
SE_51163chr12:125388547-125390026Skeletal_Muscle
SE_52044chr12:125388880-125389479Skeletal_Muscle_Myoblast
SE_52416chr12:125388883-125389960Small_Intestine
SE_53363chr12:125388696-125390142Spleen
SE_54757chr12:125388881-125390026Stomach_Smooth_Muscle
SE_55862chr12:125388927-125390161u87
SE_57189chr12:125389000-125389646VACO_400
SE_60560chr12:125385312-125426018DHL6
SE_61569chr12:125389012-125425986Toledo
SE_62372chr12:125386297-125426052Tonsil
SE_63850chr12:125388879-125389620HSMM
SE_67582chr12:125388927-125390161u87
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr12125389117125389584
Number: 1             
IDChromosomeStartEnd
GH12I124903chr12125388260125391745
Enhancer Sequence
ACTTTGTCTT CATTGAGAGC AGAATGGTAA TAACATCATC TGGAGGTTAT GATGATGTCA 60
TCTGGGTGGG AGGTAAATTT TTTTTTTCTC CTTACACTGG GCCCCACAGA AGGGGGTGAG 120
GTTTGGCTCC AGGTTTGGGG GATATAGCTA AGGAAGGATG TCAGCTCTGG GCCAAAGACA 180
GGAATGACCT ATCAGATCCC CCAGGGAAGG AGCAGGACCC TGGAGCATTA ATATCTGCGG 240
CACACAATTG TGATTTCTCC GCGTTGCAAT TTCCTTTCAC TACCCCCATG TCTAGCTGTC 300
CTAAGGAAAG AGCCAGATCC CTGAGGCAAC CCAGAGAAGC CAAGTCTAAG ATGTCAGAGG 360
TCATGGGCAG AATCTCCCAA GGCAGCCAGC TGGCTGAGTG ACAAATGACA ACAAGCACAG 420
ATTTGTGAAG AGTGCAAGCA TTCTTCAGAA ACTCCCAAAA ATACCAGTGA GGAGAAACTG 480
GTAAGTGGAC TTCCTCGAGG AGTCACGCAC AGTGCAGAAC AGACCACTGT CCCACGTGCT 540
TGCAGGGACA CGCTGGCCTC TAAACACTGG CCCACACAGC GCTGAGTCAC ACTTGCCCCT 600
CCCTCTTGCC TACGGTCACT CCCCAGCCAC AGTTGATGCT AACGAGCTTC GCCCTTCACT 660
CCCGGGAGTT CGGCAGCTTT TGCACATTTT AAGATCAACT GAGAGTTTAT AAATATGCCC 720
CGTTTTTCTA TGACCATCGC TATGGGAAGA GATGAATGTG TTCTAACCTG TTTCCCATCA 780
AAACTTGTGT TCTAACCCCA AAAGGAAAAG CAGCAATAAA AACAACCAAA ACATTTTTTA 840
AAAATAGGTT CTATAGTTTC AAAAACAATA AAAAGAATAA GAGCCAAGCC TGGAGGTGCG 900
CGCCTGTAGT CCCAGCTACT TAGGAGGCTG 930