EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS012-09633

Organism

Homo sapiens

Tissue/cell

Caco-2

Coordinate

chr12:56522490-56523810

Target genes

Number: 37
Name	Ensembl ID

RP11	ENSG00000257509
SARNP	ENSG00000205323
ORMDL2	ENSG00000123353
TMEM198B	ENSG00000182796
DNAJC14	ENSG00000135392
GSTP1P1	ENSG00000257569
DGKA	ENSG00000065357
WIBG	ENSG00000170473
CDK2	ENSG00000123374
PMEL	ENSG00000185664
RAB5B	ENSG00000111540
AC034102.1	ENSG00000255990
SUOX	ENSG00000139531
IKZF4	ENSG00000123411
RPS26	ENSG00000197728
ERBB3	ENSG00000065361
PA2G4	ENSG00000170515
RPL41	ENSG00000229117
ZC3H10	ENSG00000135482
ESYT1	ENSG00000139641
MYL6B	ENSG00000196465
MYL6	ENSG00000092841
SMARCC2	ENSG00000139613
RNF41	ENSG00000181852
OBFC2B	ENSG00000139579
SLC39A5	ENSG00000139540
ANKRD52	ENSG00000139645
COQ10A	ENSG00000135469
CS	ENSG00000062485
CNPY2	ENSG00000257727
PAN2	ENSG00000135473
IL23A	ENSG00000110944
RNU7	ENSG00000252206
STAT2	ENSG00000170581
APOF	ENSG00000175336
GLS2	ENSG00000135423
RBMS2	ENSG00000076067

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf12	MA0742.1	chr12:56523150-56523165	GGCCACACCCTTTTC	+	6.13
Klf1	MA0493.1	chr12:56523150-56523161	GGCCACACCCT	+	6.32
RREB1	MA0073.1	chr12:56523565-56523585	CCCCAAAAAACCCACAAAGC	+	6.65
ZNF263	MA0528.1	chr12:56523637-56523658	CCCTCTTCACCTTCCTGCTCT	-	6.66

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_15168

chr12:56517437-56526533

CD4_Memory_Primary_7pool

Enhancer Sequence

TGGGTGAGCG ACCACCCTCG GTCCTCTGTG CAGCATAGCC CCCTTCCACC CCTTCCATCT 60
GGGGCTTTTC CTCCTTATGC CTAGAGTCAG CTCCCTGCCT TGGGACAGTG GGCCCCAGAC 120
TTTCCCCTCT CTCCCCGCTA GCCGCCTGCC TGCTGGACGC GCCACTCTTG GAACCGACTG 180
CTCACTCTCC CCACCCACCC TTTCGCATGC CCAGACTGGA TCCTTCCACA GAATCAGGAC 240
TTCTTCCTCT ACTTGGGCAA CAGCAGTAAT AACATCTGGG GACCCCGTCT CAGCCGAAGC 300
TCTCCCTCCT AGCCAAGCCA TCTTGAACGT CCCTCTTGCT TTTGGTGCCA CTCGCGGCTT 360
TGCTGCTCCT GGAAATCCTG GTCCCGTTAC CTCTCAAAGG TTTCCCTAGT CTTTCCCATC 420
CTCCTCGAGA CTTTTTACCT ACTTAAAGCC ATACGGTTCT CTCTTTTCTC GCTTTTATCC 480
CCGGGTACCC GCTAGGACCC AGCCCCGGCC CCTGGACGAC CCTCGGGCAG CCACCTTCAA 540
GCCTCCAGCC GCCAGACTGC AGCGCGGCAG AGGCGGCTGC TGGACGGAGG GAGGGCTACG 600
GGAGGAGGTG GTGCGGCTGC TGCAGTGCCC GCGGCGCACA CTCCCCCGCA CTCCTCGGCC 660
GGCCACACCC TTTTCCGGAC TGTGGGCTGC GCTTGTTCCG TTGGGGCAGA GACCCTTATT 720
TCTGCGGCGG CCGCGTCTCC TGTGCTGAGG CGGATGCCTT CTCTCTAGTC TTGCAGAGGC 780
GAAGCCGGTT ACCCGGCCCC TCCCAGCAGA GGTGCCAGTC TAGGGGGAGA ATGGCAGCAG 840
AGAGGAATCA AAATTGACAC TAGACAGACA CAGCCAAGCT TCCCAGGCCC TGGACTGGAA 900
AGGGGAGGAG AAAGAGGGCC AAATGGCTCT AGGGGACCTG TAGCCTAGGC AGCAAGTGTT 960
TGTCTCCTCC TCATCATCAT GGAAACCAAT CTTCCTACCC CCAATACAAA GCGCAGGTGT 1020
CCTTTCCCTT AAAAGGAGTC ACACAGAGAA AGATAGAGGA AAACACACAC ACACACCCCA 1080
AAAAACCCAC AAAGCCAGGC CTAATTAGGT CTTCTGGCCC CTCCCTGACT CAAGGAAGGA 1140
CTTGCTTCCC TCTTCACCTT CCTGCTCTAG AAGCCCCGTC TGAGGGGAGT TGAGAAGGCT 1200
GGAAAAGGGG ACTTTTTTTT TTTTCTTTTT TGAGACGGAG TCTCGCTCTG TTGCCAAGCT 1260
GGAGTGCAGT GGCCCGAACT TGGCACACTG CAACCTCTGC CTCTTCAAGC GATTCTCCTG 1320