| Tag | Content |
|---|
EnhancerAtlas ID | HS012-07400 |
Organism | Homo sapiens |
Tissue/cell | Caco-2 |
Coordinate | chr12:6344730-6345350 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| FOXA1 | MA0148.4 | chr12:6344888-6344904 | CTCTGTTTACTCAAGG | - | 6.23 | | Sox3 | MA0514.1 | chr12:6344909-6344919 | AAAACAAAGG | - | 6.02 |
|
| | Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
| SE_00985 | chr12:6344038-6345660 | Adrenal_Gland | | SE_02955 | chr12:6345063-6345485 | Bladder | | SE_03308 | chr12:6337700-6345175 | Brain_Angular_Gyrus | | SE_03988 | chr12:6336456-6345847 | Brain_Anterior_Caudate | | SE_04905 | chr12:6328630-6346354 | Brain_Cingulate_Gyrus | | SE_05857 | chr12:6328573-6346408 | Brain_Hippocampus_Middle | | SE_06790 | chr12:6328750-6346091 | Brain_Hippocampus_Middle_150 | | SE_07876 | chr12:6328735-6347463 | Brain_Inferior_Temporal_Lobe | | SE_23086 | chr12:6344001-6345944 | Colon_Crypt_1 | | SE_23760 | chr12:6344109-6344912 | Colon_Crypt_2 | | SE_23760 | chr12:6344913-6345648 | Colon_Crypt_2 | | SE_24754 | chr12:6343867-6345992 | Colon_Crypt_3 | | SE_25881 | chr12:6332674-6346002 | Duodenum_Smooth_Muscle | | SE_26531 | chr12:6343650-6346116 | Esophagus | | SE_27879 | chr12:6343571-6345671 | Fetal_Intestine | | SE_28805 | chr12:6330455-6345849 | Fetal_Intestine_Large | | SE_31631 | chr12:6344094-6345036 | Gastric | | SE_33937 | chr12:6343484-6344929 | HCC1954 | | SE_33937 | chr12:6344952-6345636 | HCC1954 | | SE_37830 | chr12:6337296-6345407 | HSMMtube | | SE_41591 | chr12:6344060-6346257 | LNCaP | | SE_42122 | chr12:6344045-6346105 | Lung | | SE_50072 | chr12:6336509-6346097 | Sigmoid_Colon | | SE_52457 | chr12:6336504-6345611 | Small_Intestine | | SE_53862 | chr12:6343875-6345556 | Spleen | | SE_54512 | chr12:6320070-6346293 | Stomach_Smooth_Muscle | | SE_57134 | chr12:6344070-6344831 | VACO_400 | | SE_57134 | chr12:6344914-6345472 | VACO_400 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH12I006213 | chr12 | 6322280 | 6345639 |
|
Enhancer Sequence | GGTAAACTCA GACCAGGATC CTGGTGTCCC TGCCCCCATT GCTCTGGACA AACCCTGCAA 60
GCATGAAAGT GACAGCAGCC AAGTGCTGCT TCAGCAAGAC CCGTTCTGCC TGTGAAAGGG 120
CCCCAGGGCA CCCATCTCTT TCTCTCCCAC TTTGGGCCCT CTGTTTACTC AAGGGCAATA 180
AAACAAAGGC CGGACCAGGG GAATGACAAG TGTTCTGGCA CCGCCCACTG CTGCCAGCCC 240
GGAAGCTCTC AAGGGCAGGC GTGCTTCTGA GTCTTGGACT CCCACTCTGA CTTTGTCAGT 300
GGCTCCTGTC TGTAAGCCAG AGTTAATGTC CAACTCCAGA ATAGTAAAAG GTGACCTTAC 360
AACCATGTCA GAAATAGACC CCCAAGCAGG GCCTGTCCCT CCTCCTTCCC TGACGTCCTG 420
CCCAGATTTT AGGGATCCAC TAGCATAGCC ATCCCTTTGT TCCCCTTTCC ATCCACCAGC 480
CAGAACTTCT CTTATCCCCG AACACTCCTG TCCCCAGCCC ACCCTCTGCC CACCAGTTCT 540
CCCGGGTGAG ACGGGGGCCA TGGGAGGGAG GAGGTGCCCT GGGAGGAAGG ATTGTGTGTG 600
ACCCAGGTCT TGGTTTGTCT 620
|
