EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS012-06978 
Organism
Homo sapiens 
Tissue/cell
Caco-2 
Coordinate
chr11:128340470-128342810 
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
JUN(var.2)MA0489.1chr11:128342255-128342269GAGAGGTGAGTCAT+6
MyogMA0500.1chr11:128342427-128342438CTGCAGCTGTC-6.62
Sox3MA0514.1chr11:128341255-128341265CCTTTGTTTT+6.02
Tcf12MA0521.1chr11:128342427-128342438CTGCAGCTGTC-6.14
Number of super-enhancer constituents: 44             
IDCoordinateTissue/cell
SE_10455chr11:128336385-128345560CD19_Primary
SE_10902chr11:128321727-128394358CD20
SE_11817chr11:128332177-128365777CD3
SE_14378chr11:128332215-128357048CD4_Memory_Primary_7pool
SE_15393chr11:128334329-128354653CD4_Memory_Primary_8pool
SE_15802chr11:128333937-128343680CD4_Naive_Primary_7pool
SE_16285chr11:128336891-128349260CD4_Naive_Primary_8pool
SE_16849chr11:128332262-128356520CD4p_CD225int_CD127p_Tmem
SE_17294chr11:128324512-128398551CD4p_CD25-_CD45RAp_Naive
SE_17759chr11:128329148-128357623CD4p_CD25-_CD45ROp_Memory
SE_18249chr11:128321852-128398718CD4p_CD25-_Il17-_PMAstim_Th
SE_19114chr11:128331753-128357509CD4p_CD25-_Il17p_PMAstim_Th17
SE_20009chr11:128331567-128356080CD56
SE_20752chr11:128333828-128354747CD8_Memory_7pool
SE_21448chr11:128332404-128348475CD8_Naive_7pool
SE_21913chr11:128331599-128357479CD8_Naive_8pool
SE_22308chr11:128328960-128398600CD8_primiary
SE_25501chr11:128334490-128349805DND41
SE_25865chr11:128340548-128342812Duodenum_Smooth_Muscle
SE_30919chr11:128331670-128357481Fetal_Thymus
SE_32337chr11:128340816-128341382Gastric
SE_32337chr11:128342251-128342859Gastric
SE_39385chr11:128337567-128345541Jurkat
SE_40667chr11:128340697-128341595Left_Ventricle
SE_40667chr11:128341705-128343082Left_Ventricle
SE_42190chr11:128340760-128341616Lung
SE_42190chr11:128341942-128343034Lung
SE_44140chr11:128340654-128343087NHDF-Ad
SE_45563chr11:128331262-128345581Osteoblasts
SE_49876chr11:128332214-128345505RPMI-8402
SE_50081chr11:128340674-128345619Sigmoid_Colon
SE_52408chr11:128340738-128341587Small_Intestine
SE_52408chr11:128341713-128343047Small_Intestine
SE_53438chr11:128340678-128341634Spleen
SE_53438chr11:128341663-128343050Spleen
SE_55100chr11:128340672-128341613Thymus
SE_55100chr11:128341650-128345463Thymus
SE_58620chr11:128337654-128393684Ly1
SE_58996chr11:128336836-128368437Ly3
SE_59884chr11:128331300-128367984Ly4
SE_60892chr11:128338047-128393180DHL6
SE_61158chr11:128336682-128372908HBL1
SE_62208chr11:128321103-128398910Tonsil
SE_66273chr11:128337567-128345541Jurkat
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr11128341167128341527
chr11128341794128342415
Enhancer Sequence
GTGAACAATT TAGGAGCAAC TGAATATACA ATAATGGAAT TACAAAGAAG AATGAAACAA 60
CAGAAAATAT ATTTTTAAAA ACAATTTTCA GTAAAAAACA AGAAAAAAGA TGCATTTAAA 120
AAAAATTGTA AAAGCACTAG AAAAAATCTA ATTAGACTTC CAAGGATTAA ATTGGCCTTC 180
GTATGGCAAC TTTGAAAAAG TAGAAAGTTG GAGGTTAAGG AAAAAAAAGT TACAGTATAC 240
GAATGTAAAA ATTTTTAATA TTTTCAATGA GAATAAGCAT TTAGGACTTT TTTAAGTTAG 300
GGAAGACTCT GAAATCCTTG TTCCCATGTT AAAAGTGCAC ACGCACCAAA AGAGACAGCA 360
GATGCAAACT GCTTTGCAAG TGAAAGTATC ACAGGCATAT ATGGTTTAGG GAAATCTTGG 420
CCACAGATGG ACTTAGATCC TCTTTTCCCG ATGCACCTTT TTCCTTAGTT ATTCATGTCC 480
CTCACCAAGT ATTCTTCACC TAAGTATTGT ATAGAGCTCA CCTAGAGCAA GTTCAACACC 540
GTTCCCCACA AATGCCAATA GTTTGGGCCC AAAGAGACGG GTCCCACCAG CATTAACTGG 600
GGTTCAAGCA GAACCTCTTG TCCAGCCATC AGGGCCCAAG ACAGGCTTGA CAGCAAGACC 660
AGGTGGCTGG CAACTGGCCA GTGGAGTCCT CCCACCTGGA ACAGGGTTAA GTGAGGCTTA 720
TTTGGCCAGT CTGACTTGGG TCTGAGAACA AGACAGTTAC ACATTTTTAG GGTATGAGGG 780
AAAGACCTTT GTTTTTGCTC TGGCTCTGCA CACCTGCAAG TGCTCAAGTA CACATGTGTG 840
GGGGCGGCAG CAGGAGAAAG GGGACTGTTC CTCTCTTAAA GGGGCAGTCT CTATTCAAAT 900
GCAACCACCT CTTTCTTCTA AACCCATCAG TAACTCTGTC TAACACATTC AAGCTAACAC 960
TCAGACACAA ACTTGGACAG TGAGCCAGTG AAGCTCAAGT CAGGAAGTGG GTTTCTTTAT 1020
AGCTCTTTCC TCCTGATGTC TTCTAGGTAA CCGGTTCTTT TAAGAAGTCA CCAGAGATGG 1080
GTTAGGTTTG GATTTGGGGG AAGGGGATAA GAATTTTGTT ATAAACCAAA GAAAAGGTTT 1140
TTCCAGCCAC TATAAATGTA CAAAGAAAAA TCTTCCTAAG TGTGTAGGTA ATGAGAAGAA 1200
AGAAAGATAT GTTCACTGAT CAGGGTTAGA AAACAGGACT TTAGAAGTCT GAAGATTATA 1260
GTCTTTTCTC AGTAGGATTC TCAACTTGCT CTCTGGAATT TATTTTATCC TAGGGGTTAA 1320
GTTTTCCCTG CATGTCAACA ATGAGAGAAA TCACTAGTTA GGTATAATAG AATCCTTGGA 1380
AGGTAGTTGA ACTAGATCCT AAGTGATCAT TTGCACACCG AATTTTGTAA GCATTTATCC 1440
AGCATATAAT CTCTGAACAC TCCTCAAACG TAGCCAGAGT GTGTTGAATA GCAAAACACA 1500
ATATTAACAA CTGCATGGAG GTAGCGGAAC AAGTACTTTT TGTTTCACCA TAACGTGATA 1560
AGCTGAAAGT GTCCTACCTA CGCCTTTAAA GAAAAAAAGA ACAGAGAACC TAGCCTTGAG 1620
AGGCCTCCAT AAGAAACTCC ACCGCCTCAG CTCTGAATGT CAAACACCTC CACAGACCTG 1680
TGCCCTGTGA GCATCTCCAA CAAAGCAAGT CCCATCCTTG TTTCAGAGTT TAAACTTTCA 1740
CATTCAATCA CTCTAGGAGA ACTTTCACTC TCATTATCTC TCAGGGAGAG GTGAGTCATA 1800
CAAAAGACAA TAAAGTTTGG GGAGTTACAG TCAACAACAT GCATTGAACT CAGAAGCCCA 1860
TCACGGACTA CTGAGAGTGT CGGGACACAT GGTCTTGAGT CCTGCCACAT GGAAAAGCTG 1920
TGCTGGTCTC AACAAGCCAT GTTTACAGCT CAGGTCCCTG CAGCTGTCAC ACTACCTGTT 1980
CTACTCAGTT CTCCTGCTTC AGGGAACATA ATTGACTGGC TCTACCATGT CCACACCAGC 2040
ACCCCTCATC CTGGGGACTG CTCCAGCCAG GGACTGAGCA CAGTGAGGGC ATGCAGGTCC 2100
ACCCCTGTGA GACACAGAGC TCCTCCAGCA GACGACCTTG ACCCAAAGAT CCCCTGGGCC 2160
CAGCCAAAGT TTTCTTAGAA TGGAGCTGCA GTTGAGGGCT CTTTCTACCC AAATCTCCTC 2220
CTTCCAGACC TGCAGCATGG TCTGAAGGTT CCGCTGCCTT CTCTTCGCTG CCTTTTTTTC 2280
CTTCATAGAT GCTCCTTCCG TAAACATCTT GCACATCTAA TCATGTCTTG GCACCTGCTT 2340