EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS012-04052

Organism

Homo sapiens

Tissue/cell

Caco-2

Coordinate

chr11:62598120-62598490

Target genes

Number: 38
Name	Ensembl ID

MIR3654	ENSG00000255508
TUT1	ENSG00000149016
MTA2	ENSG00000149480
ROM1	ENSG00000149489
EML3	ENSG00000149499
B3GAT3	ENSG00000149541
GANAB	ENSG00000089597
INTS5	ENSG00000185085
RP11	ENSG00000255432
METTL12	ENSG00000214756
SNORA57	ENSG00000206597
C11orf83	ENSG00000204922
C11orf48	ENSG00000162194
UBXN1	ENSG00000162191
GNG3	ENSG00000162188
BSCL2	ENSG00000168000
HNRNPUL2	ENSG00000214753
TTC9C	ENSG00000162222
ZBTB3	ENSG00000185670
POLR2G	ENSG00000168002
TAF6L	ENSG00000162227
TMEM179B	ENSG00000185475
TMEM223	ENSG00000168569
NXF1	ENSG00000162231
U6	ENSG00000252361
STX5	ENSG00000162236
WDR74	ENSG00000133316
RNU2	ENSG00000222328
SNORD22	ENSG00000207487
SNORD30	ENSG00000207424
SNORD29	ENSG00000206653
SNORD28	ENSG00000207437
SNORD26	ENSG00000206874
SNORD25	ENSG00000202477
SNHG1	ENSG00000255717
SLC3A2	ENSG00000168003
AP000438.2	ENSG00000257002
CHRM1	ENSG00000168539

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_50967	chr11:62597677-62601588	Sigmoid_Colon
SE_65623	chr11:62597927-62602484	Pancreatic_islets
SE_68560	chr11:62598420-62625723	TC71
SE_68561	chr11:62598420-62625723	TC71
SE_68562	chr11:62598420-62625723	TC71
SE_68563	chr11:62598420-62625723	TC71

Enhancer Sequence

TACAGAGCAA ACTTATGGTA GAAGTATATT GGAAAATTCA AGGTGCATGT TTCTCAGCTA 60
AAGGCTCTTC CTAGAACTTG TTCCTTATTC ACACCAATTA TATTGCAGCC AAGTACTCTC 120
TGAAGTACTC CCTCCAGAAT AGCAATCCTG CCCTCCAAAG GATTCCTCAC AAAAAAAAGT 180
CTAAGTCCTT GCCCCTAGTT AGCCAGCCGA CCTCTTCTCT GTTGCTTATA GCAGACCCTA 240
CAGGCCCCAT CCAAGCCTAT CAGTTCCATC AGGTACCCCC CAAAATTACT TCGGTTAACA 300
GTGGTGGAGC ACAGTCCTTC CTAGATTTGA GTAAGGCTCA CTCCTCGCCT TTTCCACTCC 360
AGGTCCTTAC 370