EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
HS012-01161 
Organism
Homo sapiens 
Tissue/cell
Caco-2 
Coordinate
chr1:235095660-235098610 
TF binding sites/motifs
Number: 7             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
ELF3MA0640.1chr1:235096616-235096629TCACTTCCTGGTT-6
Nr2f6(var.2)MA0728.1chr1:235096101-235096116GAGGTCAGGAGTTCA+6.22
Nr5a2MA0505.1chr1:235095924-235095939GAAGTCAAGGTCACC+6.19
Nr5a2MA0505.1chr1:235096109-235096124GAGTTCAAGGCCAGC+8.25
RARAMA0729.1chr1:235096101-235096119GAGGTCAGGAGTTCAAGG+6.73
SRFMA0083.3chr1:235097643-235097659TGCCCATATATAGGCT+6.18
SRFMA0083.3chr1:235097643-235097659TGCCCATATATAGGCT-6.25
Number of super-enhancer constituents: 78             
IDCoordinateTissue/cell
SE_00182chr1:235096120-235101897Adipose_Nuclei
SE_00983chr1:235096474-235097221Adrenal_Gland
SE_00983chr1:235097261-235098779Adrenal_Gland
SE_01666chr1:235096626-235100084Aorta
SE_02305chr1:235096364-235100538Astrocytes
SE_03114chr1:235098161-235098725Bladder
SE_04136chr1:235096460-235097832Brain_Anterior_Caudate
SE_04136chr1:235097898-235099053Brain_Anterior_Caudate
SE_06052chr1:235096043-235100300Brain_Hippocampus_Middle
SE_07547chr1:235096391-235100017Brain_Hippocampus_Middle_150
SE_08384chr1:235097173-235098864Brain_Inferior_Temporal_Lobe
SE_09160chr1:235089274-235102029CD14
SE_13412chr1:235095208-235096433CD34_Primary_RO01536
SE_13412chr1:235096493-235101824CD34_Primary_RO01536
SE_14852chr1:235090111-235096258CD4_Memory_Primary_7pool
SE_14852chr1:235096281-235101639CD4_Memory_Primary_7pool
SE_19577chr1:235094887-235096195CD4p_CD25-_Il17p_PMAstim_Th17
SE_19577chr1:235096550-235100566CD4p_CD25-_Il17p_PMAstim_Th17
SE_21117chr1:235097106-235100877CD8_Memory_7pool
SE_23314chr1:235092463-235096122Colon_Crypt_1
SE_23314chr1:235096491-235100470Colon_Crypt_1
SE_23955chr1:235095731-235096096Colon_Crypt_2
SE_23955chr1:235096605-235097246Colon_Crypt_2
SE_23955chr1:235097251-235098787Colon_Crypt_2
SE_25800chr1:235089687-235101859Duodenum_Smooth_Muscle
SE_26806chr1:235096564-235097115Esophagus
SE_26806chr1:235097145-235100451Esophagus
SE_27663chr1:235089063-235101555Fetal_Intestine
SE_28576chr1:235088850-235101396Fetal_Intestine_Large
SE_29689chr1:235096351-235100491Fetal_Muscle
SE_31235chr1:235096206-235101509Fetal_Thymus
SE_31572chr1:235091850-235096149Gastric
SE_31572chr1:235096504-235100646Gastric
SE_32492chr1:235096171-235101826GM12878
SE_33758chr1:235092170-235101690HCC1954
SE_34767chr1:235092103-235099043HeLa
SE_36058chr1:235098298-235099637HMEC
SE_36952chr1:235097341-235100352HSMMtube
SE_37966chr1:235095673-235098616HUVEC
SE_38924chr1:235096504-235100475IMR90
SE_40307chr1:235097907-235099855K562
SE_40653chr1:235096334-235100704Left_Ventricle
SE_41640chr1:235093134-235096135LNCaP
SE_41640chr1:235096428-235097169LNCaP
SE_41640chr1:235097171-235098761LNCaP
SE_42265chr1:235093078-235096175Lung
SE_42265chr1:235096397-235099904Lung
SE_43462chr1:235092226-235096141MCF-7
SE_43462chr1:235096235-235101604MCF-7
SE_44202chr1:235096244-235101645NHDF-Ad
SE_44805chr1:235096846-235100768NHLF
SE_45558chr1:235095403-235101783Osteoblasts
SE_47119chr1:235087515-235103374Panc1
SE_47599chr1:235093135-235096097Pancreas
SE_47599chr1:235096544-235098759Pancreas
SE_48462chr1:235097280-235101477Psoas_Muscle
SE_48697chr1:235096543-235100576Right_Atrium
SE_50040chr1:235096232-235101854RPMI-8402
SE_50071chr1:235089709-235100691Sigmoid_Colon
SE_51271chr1:235096309-235101796Skeletal_Muscle
SE_51773chr1:235097396-235099619Skeletal_Muscle_Myoblast
SE_52352chr1:235089712-235101497Small_Intestine
SE_53330chr1:235094402-235096188Spleen
SE_53330chr1:235096392-235100521Spleen
SE_54553chr1:235090275-235096009Stomach_Smooth_Muscle
SE_54553chr1:235096129-235101782Stomach_Smooth_Muscle
SE_55407chr1:235096449-235096964Thymus
SE_55407chr1:235097231-235099877Thymus
SE_56760chr1:235095688-235096114VACO_400
SE_56760chr1:235096269-235098211VACO_400
SE_56760chr1:235098225-235098867VACO_400
SE_57395chr1:235098213-235098773VACO_503
SE_59259chr1:235089283-235124733Ly3
SE_60969chr1:235059965-235155853HBL1
SE_61435chr1:234961094-235124239Toledo
SE_62329chr1:235047040-235185428Tonsil
SE_63542chr1:235097329-235099682HSMM
SE_65393chr1:235092372-235101616Pancreatic_islets
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr1235096560235096855
chr1235097868235098070
Number: 1             
IDChromosomeStartEnd
GH01I234953chr1235089124235101946
Enhancer Sequence
CCTCTGGAAA AACAGAAATT TTATGACCCA CAATTAAAAT GATTTAAGTA ATAAATAACC 60
CTGATAGCTT GCCCCACCAA GTGTATGCTA TGTTCCACAC CCCAGGCCCC TCCACATCCA 120
TCTCCTTGCC GAGCCCTCTA ACAACCTTAC AAGGGAGAGA CTTTTTACCC TCACTTCCCA 180
GAGGAGGACA CTGAGGCCAA AGAAGGGAAG GGATTCCCCA GGTGACACCG TAAGTGACAG 240
AGTCAAGACC CACATGGCCT GGCTGAAGTC AAGGTCACCC TAATTCCTCA CACAGCCCCA 300
CCAGAGGTTC CCACAGTGCT GTGTGCCAGC CAGGTGATAA GGCCTTTCCA CAAAGGACAT 360
CAAAATACCT CAACAGGCTG GACGCGGTGG CTCACATCTG TAATCCCGAC ACTTTGGGAG 420
GCCGAAGCAG GCGGATCACC TGAGGTCAGG AGTTCAAGGC CAGCCTGGCC AACATGGCAA 480
AACCCCATCT CTACTAAAAA TACAAAAAAT TAGCCAGGCA TGGTGGTGGA TGCCTGTAAT 540
CCCAGCTACT CGGGAGGCTG AGGCAGGAGA ATCGCTTGAA CCCGGGAGGC AGAGGTTGCA 600
GTGAGCCAAG ATCGTGCCAT TACACTCCAG CCTGGGTGAC AGAACGAGAC TCCATCTCAA 660
AAAAAAAACA AAAAAAACCT CATCATCAGT AGAGAACTGT CACCTTCCTA AACGAGGAAA 720
CTGACACTTT TAAAAGCAAA CAGATTTCTG AACTTGGGGT TAATGATAAA ACTGGAAAAA 780
CATAAAAGAC TCCCTGTTCC TCTCCTCCAT TATCAATATG TGCCTTAGAT TTGGATGCCA 840
AGTCAAATCT CACCAGAACT ATATCCTCCA TGGTAACTTA TTAAAGAGTC AATCAAAGTT 900
TGCTTTAAGA GAAAAGTAAA TACACCCAAC TTTCCATACA ATGCCGGACC CCGAGTTCAC 960
TTCCTGGTTT CACTGTTGAC TCAGGTTGCA ATCCTAGATA AGTAACTACA CATGCTCACT 1020
GCCCTGGGCC CAAAGCTGGG GCGAGAGCCT GGAATCAGCG CACCCCCAAG AATTCCGGAA 1080
CATGGGAAGA TGCCCATCTT TCATGGAGGG GGCATGCCTC GAAGAGGAAA ATCAGGCAAA 1140
AGGCCGTGTG CAAAGCTCCA CGTGCAGGTG CAAGCTGCTT GTCCCTGAGT CTCTGATTGC 1200
GAGGAAAGGG GTCACCCGCT GGTCGCACCA CCAACAAAGC CCTGCCATCC TTTGGCTCTG 1260
CGCTCACCCA TAATTACTGG GCGTGAGGTG GGAAGGGCCG CCCTTTGGGA CTCAGGTGGT 1320
GGGGAGGCTG CAGAACAGAG TCGGCAAGTC AACTCCAATC ACAGTAAGCA TTTTCAAAGA 1380
AACACATAAA AATAGCCAGA AGTGGGTCAG CACTTCCAGT GAGGTTAGAG ACAGGAAATT 1440
GGGACAGACT CCCGGTCCTG TGTAGAGAGA TAAAAGTTTT ATTTCATAAG TACAAACTCA 1500
TACTCTTTCC AATCTGATTC CTCGTTTCTT TTCTTTTGCT TTTTCATCTC CTCTGTCTTT 1560
TGGATACACA GGAAACACAC ACACACAGCT AACAAAAACA GTGTGATGTT GGAATCTTGC 1620
TCCTTCAGTT CTAAGGTCCT CTTTTTCCTG AAGCTGAAGA AAAAAGATAC TTAAAGAAAA 1680
CTTACTTGAG AGTCAGGCAG GAAGGGGAGA TGGGATACAC ACTTTCCCTA TCTTTCAGGT 1740
TTCTGCAATC TCAGCGCATG CTGCTTAAGA GGAAAAGAGC AGCAAAGCAG ATGAAAAGCA 1800
CTGCATCCTT AAGTGATTTA CCTGTTCCCA AGCAGGCCTG CCTCACACCT GCCTCCCCCC 1860
AGTTCCCTGT CATTGACCCT CCCGCCACCA TATCTGTGGC ATCTGGTGTG CTGCACACAC 1920
AGTATATGTG TGCAAGTGCA TGGTATATAC ACATAGCACA CATGCATACA TGCTATAAAC 1980
ACATGCCCAT ATATAGGCTC AGTGCACAGG TACGCACAGT GCTCAGGTAC ACAGAGTACA 2040
CACACCTGCT AGCCACATAC ACTCTCAGTG TACACACATG GTGCTCATGC ACACATGGTA 2100
GTGCATGGTG AATCCACATA GCATCCATGC ACACACACAG TACCCACACA CACACGCGGT 2160
ACATACACAT GGCACCCCTG CACATACACA GTAGACATGC GTAACCCAGA AAGTGGTTCT 2220
TGCTCTCTCT GCAACCTTAA GACTTTGGCA GTTTTTGTTA ACTCCCACAC TTGGCAGGAT 2280
TACATTTCCT TGTGGCCTCA ATGACGTGAT AGGGCAGATT TATTGGGCTT ACAGAAAAAA 2340
AGAGAGAGGA GAGAGAGCGA GAGAGCGAAC AGTAAACTCT GCTGTGCAGT CAACCTGGAC 2400
CTTGGTTTTA AGTTGCACAT CATCAGGGCC AAGAGAGAAG ATTTGGCAAC ATGGGGTGGT 2460
TTGGTGAGAG TCGGCATGTT TCACTGGTAA TCTGCTGGAG CACTAAAATA TATACATCCA 2520
AAGGTTACCT TCTTTCAATT CACTGAAAAA TAAAAGGAGC TTCAAGGCTG GACCAAATAA 2580
CACACATAAA TAACTCATGC ATGCCTGCAT GCATAGATGC AAACATACAT ACCCAAGATG 2640
TGTAGCAAAC AAAACAGGCA CAGTGCTTTC AGGAGAAACT TGGGTGTGGA AGTAAGTTCT 2700
ACCTTTTTGC TCTATTTTCC TCCTGGAGGG AGAGAGGAAA AGCAGCTGCC TAAATGCTCA 2760
GTCAGCCCAC AAGCTGTCAT GCGTGACTAT CTCCAGGGCA GACAGGAGAG CAGGAACCCC 2820
TTTCTGAAGC TGAGTTCTGA TGCAGAATGT TTTCAGGGCT TAAGACAGCC CCCACACAGC 2880
TAGCCAACAG AACTTTCTGG GCTGCGGTCA GTTAGCTATG TCGCACAGGA ATGGCATCTG 2940
CTTTCACTTA 2950