EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS012-00623

Organism

Homo sapiens

Tissue/cell

Caco-2

Coordinate

chr1:150898990-150899520

Target genes

Number: 15
Name	Ensembl ID

ADAMTSL4	ENSG00000143382
GOLPH3L	ENSG00000143457
CTSS	ENSG00000163131
UBE2D3P3	ENSG00000224690
CTSK	ENSG00000143387
ARNT	ENSG00000143437
RP11	ENSG00000224800
SETDB1	ENSG00000143379
CERS2	ENSG00000143418
ANXA9	ENSG00000143412
BNIPL	ENSG00000163141
MLLT11	ENSG00000213190
CDC42SE1	ENSG00000197622
GABPB2	ENSG00000143458
SEMA6C	ENSG00000143434

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr1:150899103-150899114	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:150899104-150899114	GGGGCGGGGC	-	6.02
RREB1	MA0073.1	chr1:150899163-150899183	GGGGGTGGGCTGGTGTGTGG	-	6.18
TBXT	MA0009.2	chr1:150899245-150899261	TCACACGAATGTGTGA	+	7.05
TBXT	MA0009.2	chr1:150899245-150899261	TCACACGAATGTGTGA	-	7.05

Enhancer Sequence

GAGGTGCGGG GAATACTGTT GAGTTATTTG GTGACCAAAG GCTTATCTGG GACGTTTTGT 60
TTGTGGGAGG GGGTCGGGCG AGGGTGGGAA GGAAGTCTTC CCCAGAGGCG AACGGGGGCG 120
GGGCTGAACT GGGTTTGCGA ATGGGTAGGA CGCACCCCTA GAATGGGTAG CACGGGGGTG 180
GGCTGGTGTG TGGGCAGAGG AAAATGGAGG CGCTGAAAAT CAGATTTTCT TTAACCGTTT 240
GATTAAAAAA GCAGTTCACA CGAATGTGTG AAGTATTTGG ATTGTGGATA TTAGGTACCC 300
ACGTTTTATT CCCAGGTTGC TTTACTTCTC TGTACTTTGG GGGAAACCTT TTTGCTGCAA 360
GCTTTCGTGT GTTTGAATAT CATAGACTTT TTAAAAAGTA AAATTCCACA TGGAAGCAAA 420
GTAATATAAG GGGAACAAGT AATGAAAGAG AAAACACTGA GTTAGTGAGT TCCAAATCAA 480
CTCCATCCCC AGGTGGGGTT TTGTTTAAAT TAGGCATAGC ATACAAAGAT 530