| Tag | Content |
|---|
EnhancerAtlas ID | HS012-00325 |
Organism | Homo sapiens |
Tissue/cell | Caco-2 |
Coordinate | chr1:54742690-54743650 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:54743272-54743293 | GTGATGAAAATGAAAGTAAGT | - | 6.53 | | NR2C2 | MA0504.1 | chr1:54743389-54743404 | TGACCCCTGCCCTCT | - | 6.43 |
|
| | Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
| SE_01019 | chr1:54742220-54743317 | Adrenal_Gland | | SE_01019 | chr1:54743357-54745653 | Adrenal_Gland | | SE_01595 | chr1:54735208-54747683 | Aorta | | SE_03451 | chr1:54742376-54744111 | Brain_Angular_Gyrus | | SE_04901 | chr1:54742151-54747662 | Brain_Cingulate_Gyrus | | SE_05919 | chr1:54734892-54749698 | Brain_Hippocampus_Middle | | SE_07802 | chr1:54742248-54747743 | Brain_Inferior_Temporal_Lobe | | SE_08904 | chr1:54742651-54742878 | Brain_Mid_Frontal_Lobe | | SE_24580 | chr1:54742299-54743037 | Colon_Crypt_2 | | SE_24580 | chr1:54743350-54744906 | Colon_Crypt_2 | | SE_25961 | chr1:54737420-54746794 | Duodenum_Smooth_Muscle | | SE_26701 | chr1:54737688-54747569 | Esophagus | | SE_28122 | chr1:54742303-54745062 | Fetal_Intestine | | SE_29698 | chr1:54742317-54744189 | Fetal_Muscle | | SE_31383 | chr1:54733777-54747551 | Gastric | | SE_41585 | chr1:54742296-54743306 | LNCaP | | SE_41585 | chr1:54743339-54746155 | LNCaP | | SE_42582 | chr1:54737622-54745972 | Lung | | SE_46626 | chr1:54742299-54743302 | Ovary | | SE_46626 | chr1:54743369-54746342 | Ovary | | SE_47967 | chr1:54742267-54743053 | Pancreas | | SE_47967 | chr1:54743288-54743925 | Pancreas | | SE_50141 | chr1:54737715-54747690 | Sigmoid_Colon | | SE_52383 | chr1:54737623-54747577 | Small_Intestine | | SE_54182 | chr1:54736914-54745759 | Spleen | | SE_54942 | chr1:54737059-54745949 | Stomach_Smooth_Muscle | | SE_65414 | chr1:54736995-54742916 | Pancreatic_islets | | SE_65414 | chr1:54743507-54745020 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I054271 | chr1 | 54736922 | 54747506 |
|
Enhancer Sequence | GGGCAGACTA TGGTTGATTC AGTTCGAGCC TGGAACCAAG CCCCATGCCT TGCATATCAG 60
AGACGGTCAA TGACAGTCAT AACCACAGTC CTTTCTCCTT CTGTGACTTC ATCTCCCCAT 120
CTATAAATGA GAAGCTTGGA CTACATCAGG GATGGCAAAG AGGATATGTA CCACCACCGA 180
CACATTCACG TTCATGGTAG ACATTGCCAG TCACTATCTG TTGAGCCTGG ACACACAGCT 240
TCAGAATCAT TCTCACGGTG TTCTCAGCAG CCACCACACA TCAAGCAGAG CTGGCATTTG 300
AATGGGGACT TCTTTGCTAC TTCTTTAGAT AAGAGTTATG GTTTCTCTAT CTCCTTTCGG 360
TCTCTCCCTC CTTTTATCTA ATTCTCTACT CTCCCTGCTT CCGCCATCCA ATCAGATGTG 420
CATCCACATT TGGACTTTGG AGTGTTTGTG GAAGAGCACC CCATGAGGAA CCAGGAAAGC 480
TGGGTTTAGA CTCTGATTAC AGCCCCTGGT TAACTTGGGG CAAGTCATTC ACCTTTCTGA 540
GTCTCACTTT CCCAATCTGC ATGCCTTCTC TGCAGAAACA CTGTGATGAA AATGAAAGTA 600
AGTTGCATGT TTAAAAACAC TATGTAACTG AAAACAACTA TTGGAATTTA AAAACAAAAC 660
AAGAAGAAAA ACAGCCTGTA CCCAATGCTC AGTTCTCTAT GACCCCTGCC CTCTTGTGAG 720
TCCCGTTTTG GACTTAGAAA TCCTTACTGG ACAGTGCCCT CCTTAGGACC ACCTTAGGGC 780
CAAGGAACTT AGAAATTCTT ACTGGACAGT GTCCCCCTTA AGGGGGAACT AGGGAACCCA 840
CCCAGATCAG TGAGGCTGGC CAAAGCCAAG CTGGGTTTGC CAGATGTGCA GCCCAACCGA 900
GCTAAGCTGC GTGGAAAAAA AAAATGCCAC TGCTTGATTA TGTAAAATCC ATCTGGATCC 960
|
