EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS007-00935 
Organism
Homo sapiens 
Tissue/cell
BE2C 
Coordinate
chr1:154983680-154986220 
SNPs
Number: 2             
IDChromosomePositionGenome Version
rs1870940chr1154984363hg19
rs3753639chr1154986091hg19
TF binding sites/motifs
Number: 6             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
GCM1MA0646.1chr1:154985139-154985150CATGCGGGTGC+6.02
RREB1MA0073.1chr1:154985266-154985286CCCCCATTCACCCCCCCACC+6.83
RREB1MA0073.1chr1:154984133-154984153CCCCCAACCACCACACACAC+7.04
STAT3MA0144.2chr1:154984454-154984465TTTCCCAGAAG-6.62
Tcf12MA0521.1chr1:154985327-154985338AACAGCTGCTG+6.32
ZNF263MA0528.1chr1:154984750-154984771GAAGGAGGGAGAGGGATGGGG+6.82
Number of super-enhancer constituents: 52             
IDCoordinateTissue/cell
SE_00535chr1:154968005-154987480Adipose_Nuclei
SE_01029chr1:154971412-154987437Adrenal_Gland
SE_03046chr1:154984052-154984886Bladder
SE_03571chr1:154984794-154985582Brain_Angular_Gyrus
SE_04371chr1:154975125-154986197Brain_Anterior_Caudate
SE_05420chr1:154975117-154986988Brain_Cingulate_Gyrus
SE_06112chr1:154975116-154991667Brain_Hippocampus_Middle
SE_07136chr1:154971348-154985701Brain_Hippocampus_Middle_150
SE_08574chr1:154982139-154986021Brain_Inferior_Temporal_Lobe
SE_12314chr1:154979992-154986177CD3
SE_14762chr1:154971157-154987264CD4_Memory_Primary_7pool
SE_17044chr1:154979797-154987116CD4p_CD225int_CD127p_Tmem
SE_17548chr1:154971096-154992943CD4p_CD25-_CD45RAp_Naive
SE_17979chr1:154971185-154991480CD4p_CD25-_CD45ROp_Memory
SE_18930chr1:154975194-154992517CD4p_CD25-_Il17-_PMAstim_Th
SE_19307chr1:154971380-154987240CD4p_CD25-_Il17p_PMAstim_Th17
SE_23265chr1:154975084-154987002Colon_Crypt_1
SE_23923chr1:154975083-154985339Colon_Crypt_2
SE_23923chr1:154985412-154986459Colon_Crypt_2
SE_24954chr1:154983079-154985424Colon_Crypt_3
SE_24954chr1:154985450-154986785Colon_Crypt_3
SE_26282chr1:154975186-154984319Duodenum_Smooth_Muscle
SE_26282chr1:154984385-154986244Duodenum_Smooth_Muscle
SE_26626chr1:154971404-154992820Esophagus
SE_27977chr1:154983618-154986325Fetal_Intestine
SE_29162chr1:154984039-154986197Fetal_Intestine_Large
SE_31489chr1:154971403-154990904Gastric
SE_32905chr1:154984101-154985106H1
SE_33691chr1:154982048-154986104H2171
SE_34425chr1:154983343-154984289HCT-116
SE_34425chr1:154984489-154985483HCT-116
SE_35099chr1:154984724-154986103HeLa
SE_40187chr1:154984745-154986191K562
SE_41104chr1:154983315-154986202Left_Ventricle
SE_41600chr1:154972085-154986790LNCaP
SE_42490chr1:154975153-154987405Lung
SE_46942chr1:154984492-154985291Ovary
SE_48331chr1:154983306-154985524Psoas_Muscle
SE_48970chr1:154983462-154986333Right_Atrium
SE_50133chr1:154971335-154992744Sigmoid_Colon
SE_51640chr1:154983045-154986114Skeletal_Muscle
SE_52379chr1:154971308-154992003Small_Intestine
SE_53597chr1:154971362-154987092Spleen
SE_55030chr1:154983136-154985121Stomach_Smooth_Muscle
SE_56872chr1:154984095-154984717VACO_400
SE_56872chr1:154984813-154985395VACO_400
SE_59127chr1:154971104-154991422Ly3
SE_60203chr1:154969567-154991253Ly4
SE_61653chr1:154971190-154991278Toledo
SE_62469chr1:154971183-154991923Tonsil
SE_65436chr1:154971139-154985261Pancreatic_islets
SE_68767chr1:154980220-154985610H9
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr1154984290154986200
Number: 1             
IDChromosomeStartEnd
GH01I155010chr1154982643154986930
Enhancer Sequence
GCCCTTCGGC TGGCTCAAGC CAGCAGTGTT GGCCTTCGTG GCCCCCAGCC CTGCACTGGA 60
CCCTGCCTGA GGTCAGCACC CGGAAAGAGT TCCCATCTCC CTTTTCTTTC CAAGACCAGG 120
CCAGTGGCCT CCACCTTTTG GTTTCTTGGT GCTGGACATA CCCTGCCAGG TGCCCTTGAG 180
CACTGAAGGG TAGGTGATAG GCACTCCCAC CTTTACCCCC TCCCAACTTT CTCACCCTGA 240
AGTCTTCCCC CAACCAAGGA CAGGGCAGGC TTGACTCAGG GCCCAGTTTC AAGAGAGCTG 300
CCCACCGGCT TGGCCGGTCT AGCAGGCCTG ACAGTGAGGG GAGCCTGGGG GGGTGGCGGG 360
AAAGAGGGGA GTGATGGGGT GGGGCCCCCA GTTCTTCCCC CTACCAGGCA AACAGACCAA 420
ACAGACCTTG CCCGGTTCCC TGGCACAGCT GCACCCCCAA CCACCACACA CACCCATGCC 480
CACAAGGTCT TAGCAAGAGG GGGCATGCCA GATTGGGTGG GGATGGGCCG CCTTCATGGG 540
GCGTCAGGGG ACTGGGCCCT CTGGGATGCA GAGGTGGGAA AGGTGCCCAA GGTAGGGTGG 600
GCACCCTGGC ACCAGTGCCC TGCCCTGGCA GAAAGAAGGG GGAGGCCTTT GCCCCACCCA 660
TCCCTCCCAG ATGATGGGTC TAGGAGGGCC CCTTGGCCTG GTTGGCACCA CCATAGCTCC 720
AGGTGGCACC TATATTGGCA TGGGTGTTAG AGCCCTGGGT AAGGGTTAGG GGAGTTTCCC 780
AGAAGCTAGA GAAGCTTATG AACACCCTCT CCTTCCCACA CATGTCCTCT GCCTCTCCCC 840
CTCTTTCATT GCTACCTCTT GGCCATGGGC ATTGGATTTG GGCCTAAGGA GTTAAACACC 900
CACCCTTGCC CAATCCCTGT GTGAGTTGCG TGGTGAACGA GCCTGAGCCT GTGACCTGAC 960
AGTGAGGTCA GCCAATCAGC GCCCCCACCA CACCAAGTTG CCACGGAGAC CGGCCCTGGG 1020
GTGGGAGAAA GGAGGCGGGT TTAGCAGCGG GAATGGGTGG GGTGGGCAGG GAAGGAGGGA 1080
GAGGGATGGG GTGAGCCACG TGCCTGCCAG TGCCCAGCTC CCAGCCAATG GACAGCGAGG 1140
ACAGCCCCAC CCATCCCCCT TAGGAGGGAC AGGATCCACT TGGGCCCAGG AGGGTGCCTA 1200
CTGCTGCTTA AGTAGCTGCA GCCACTGTTG CTGCTGCTCC TCCTGCTGCT GCTGCTGCCC 1260
ACCTGGTTTT TGTTTGTTCC CAAGTCTGGG GGCCATTTGC CACTTGTACC ATTTGTAAAG 1320
TACAGGCAGG AGGATTAAAG GGAGCAGGGA GAGCTCCCAG ATGGCTTGGT TCCTAGGGAG 1380
AGAAGTGGTT TGCGGACTTA CGGTGGGAAC AGGTGAGCTA TCTAAGGGTG CCTAGAGGTG 1440
GCTTACAAGC AAAGAAGGAC ATGCGGGTGC TGCTCACCCA AGGTTTCTGT GCAGGAGCCC 1500
TGGCCTTGCA ATGAAGAGGG CAGGCAGGGA GGCAGACACA GAGAATGCAC TTCTTGTGTC 1560
CTAAAGAGGA AATTTGTGGC TTGACTCCCC CATTCACCCC CCCACCCAAA AAAAAAAAAA 1620
ACCTTTCCCC ATCAATGGCC AGGTCTGAAC AGCTGCTGGA GTGGCAGAGG GGACACTGAC 1680
AAAATGTCAG TGGGACTTGC CTTAGGGATC ATCTGGGCCA GTCTTTAATA TTACATATGA 1740
GGAACAGGCT TCCTCAGGAA AGGAAGTGAC TTGTCCAAAG TCATGTAGCT AGTAGTAGCT 1800
TGGTTCCCTC AGGGTGATTT GAGGGAGGGA GGCAGACCTG TCCCCAAGTA GTTTTCTTAA 1860
CAGAGGCCAT CTGTATAGTG GAATCTGACC CCAGGCTAGG CCAAGGCCAG AACATTTATC 1920
GAATCCCTAC TGCATATCAG GCATTGTGCC ATATTTGGTC TCATTTAACC CTCACCACAA 1980
CCCTAGGAGT CAGGTGGAAT TATCCTATGT TACAGATGAG GAAGGCGGCT CAGAGATTAA 2040
ATCACTTGTT TAAGGTCATG GAGCTAACTG GTGGCAGAGA CAGGATTCAA ACTCAAGCCT 2100
GGCTGACTCC AGAGCCCAGT TCTTTCCAAG CCCCAGCACT GTCTCCAGTT GCTCCAGACC 2160
CACAAAATGT CAGGGCTGAA GGTCTGAGCC ATTGGGGCCA CTACTTCCAC CCCCTCCTTG 2220
CACAGCTGAG GAAATGGAAG CACAGAGAGA AATGACTTTC CCAAGGTCAT TCAGCAAGAC 2280
AGTAGCAGAG CCAGGATTTA AAGCAGGTCT CACCCCCTTC CAGGCCCCAA CCCCTGCCGA 2340
CACCTCTGCC AGCCTTGGTG CTCTGCACCC ACCTCCTGGC TGCTCTGCAC CCACCTCCTG 2400
TGGCTGGGCC TTGGAGGGTA AAGGATAGAG AGCAGGACCA AGGCCTTCTG GAGACGGGGC 2460
TCTCCTGGAA TAGGGAGGGA GGGGTGGCAG TAGCTGAGGG GGAGGTGGGG GGTGGGACTG 2520
GAACTTGGCC TATTGGCAGT 2540