EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS006-29238

Organism

Homo sapiens

Tissue/cell

Astrocyte

Coordinate

chr3:194359150-194361510

Target genes

Number: 8
Name	Ensembl ID

GP5	ENSG00000178732
AC046143.7	ENSG00000233058
ATP13A3	ENSG00000133657
AC046143.5	ENSG00000231770
AC046143.3	ENSG00000229334
TMEM44	ENSG00000145014
LSG1	ENSG00000041802
FAM43A	ENSG00000185112

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr3:194360645-194360656	AAGCCATAAAA	+	6.62
Foxd3	MA0041.1	chr3:194359707-194359719	AAACAAACAAAC	-	6.32
RREB1	MA0073.1	chr3:194360714-194360734	TGGGCGGGGGTGTGTGGGGG	-	7.45
SRF	MA0083.3	chr3:194359219-194359235	TTTCCATATAAGGTAA	-	6.21
SRF	MA0083.3	chr3:194359219-194359235	TTTCCATATAAGGTAA	+	6.8
Zfx	MA0146.2	chr3:194359460-194359474	GAGGCCGAGGCGGG	-	6.01

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I194639

chr3

194360549

194361935

Enhancer Sequence

TGGTGACAGA GACTCCATCT CAAGACCAAA AAAAAAAAAA AAAATTTAAT CACAACCACC 60
AAGACCCTTT TTCCATATAA GGTAACATTT GCAGTTTCCA GGGATTAGGG CCTGATATAT 120
TCAGGAACCA TTGTTCAGCC TCCTACACTG CATCTCCACA AGCTTCATGA CAATTCTTAC 180
AAGAAACTAT GGGTTTTGGA GATGGCCCTC AGTCGGGGAG CTGCTCCCAG TCACTGGACA 240
AGCTGGCTCA CGTAAAGAAG CAATGGGAGG CTGGGTGCGA TGGCTCACAC CTGTAATCCT 300
AGCATTTTGG GAGGCCGAGG CGGGTGGATC ATTTGAGATC AGGAGTTCGA GACCAGCCTG 360
GCCAACATGG TGAAACCCTG TCTCTACTAA AAATACAAAA AATAGCCAGG CATAGTGGTG 420
GGTGCCTGTA ATCCAGCTAC TTGGGAGGCT GAGGCAGATC ACTTGAGCCC AGGAGGCGGA 480
GGTTACAGTG AGCAGAGATC ACGCCACTGC ACTCCAGCTT GGGCGACAAA ACAGGACTCT 540
TGTCTCAAAA AACAAGCAAA CAAACAAACA AAACAGAAGC AATGGGAAGA GTGTGGGCTC 600
TGGAGCCTGC TGATCTTACA CTGGAATTTT CCCTCCGCAT TGCAGCAGCT GTGCTGTGAC 660
TTGGGGCAAA ACACTGGTCC TCTCTGCACT TGTGTGTTCC TTTCTGTAAA AGGAGGAAGG 720
TCAGCTAATG GGGGGGAGAC ATGCAGCTCA GTTCTTGGTT CTCATCCCTA CCTATCCTCT 780
GTTGGGGATC TCATTGGGTC TCTGGCTTTA ACTACTGTCC CTGTACCTGC ACCTCCCGAA 840
TGCGCAGCTC CAGGTCCCTC CTTCTCAAAC TTTAGACTCA CATACGCAGC TGCCTACTTG 900
ATAACTTGAC GTCTCCCCTG CATGCCTAAT GCACACGTCT AAAGCCAAAC TCCTGGCTCT 960
CCCTCACAGG GCTCTTCCAC CGCAATCATC CTTGCTTCAG CTGACTTGCC GTCCTGGTCC 1020
TGGGGGCCCA AGCCCCAGTG CCTGCGCCAC TCTATTACAA AGACACCTCT AAAGGGTGAA 1080
GAGTGCCGTC TTTCTACCAG GCTGTGAGCT TCTTGCAGCC AGGGTTGTTT AGTTTACACT 1140
TGCATCCTCA GCTTCTAGCT CAGTGCCTGG CACATAATAA GGAAAATATT TACTGAATGA 1200
ATGCACTGAT TTTTTGATTT TTTTTTTTTT TGAGACTGTC TTGTTCTGTC TGTTGCCCAG 1260
GCTGGAGTGC AGGGGTGTGA TCTTGGCTCA CTGCAACCTC TGCCTCCTGG GATTACAGGT 1320
GCGTAACACC ATGCCCGGCT AATTTTGGTA TTTTTAGTAG AGACGGGGTT TCACCATGTT 1380
GGCCAGGCTA GTCTTAAACT CCTGACCTCA AGTGATCCAC CCGCCTCAGC CTCCCAAAGT 1440
GCTGGGATTA CAGGCGTGAG CCACCATGCC TGGCCGGATA TGCTGATTTT TAAACAAGCC 1500
ATAAAAATAC AACATGTACT ACAGCAGGGG CATCTTTAAA GTACATTGAC GACACCCCGC 1560
ATTGTGGGCG GGGGTGTGTG GGGGAAGGTT TCCAAGAAAT AATGCATAAG CTGGGCCTTG 1620
GAGAATGTTT GCTTTTGGCA ACAAGGCCAT GGCAGCAGCT CTGCAGAGGC CCTTGGAGGC 1680
GGCAAGAGAT GGTATAGGGA GAAAGGCAAA TAGCAGAGGG AGGGCAGCAC CTGCAGGAGG 1740
GGAGGCGAGA CGGTCAGCGT TCGGTAGCGA GGGAGTCGGG ACTTCATCCT GCCGTGAACA 1800
CTTTGGACGG TATCTTCTAA CTAGCTCCCT CTGGGTCATT AGAACCCTGC CCAGGTTCTC 1860
CCTGTACTTT CCACAGGGCT CTGCACGTGG TCGGCCCTCA GGAAATGAAT CAGTTCCTTA 1920
ACCAGGCTCC TCAGAGGTCC AGCAGCTGCC CAGGAGCTAA AGATAATGTT TTTGGCCATG 1980
GTTCAGAGTT AGCCAAAAAG AAAAACTAAC AAGAGGACCG CAGCACTTGT CCTCCTGGAC 2040
AGTGGGCAGT GATGTGACTG CTCAAAGGCA TTTCCTGTTG GCAGAGGTGG CAGGACCTCA 2100
GGCACCGTCC TTCTGAAGGA AAGGCTGCAG CGGCCTGGGC GGCCCTACGG GAGTGGGCAG 2160
CCAATGGTGA CCATAAATCC CAGCCGCCTG GCGGAGACAG GCCAGCAGCT CAACAGCTTT 2220
CTCTTCTGGG AGGGCACGTT GCTTGAATCC GGGAGAGGGA GGTTCCAGTG AGCCGAGATC 2280
ATGCCACTGC ACTCCAGCCG GGGCGACAGA GTGAGACTCC GTCTCAAAAA AAAAAAAAAA 2340
AAGAAAACCA GAAATACCAG 2360