Tag | Content |
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EnhancerAtlas ID | HS006-24410 |
Organism | Homo sapiens |
Tissue/cell | Astrocyte |
Coordinate | chr20:30198270-30199050 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
STAT1 | MA0137.3 | chr20:30198568-30198579 | TTTCCAGGAAA | + | 6.62 | Stat4 | MA0518.1 | chr20:30198568-30198582 | TTTCCAGGAAAGGG | + | 7.64 | ZNF263 | MA0528.1 | chr20:30198607-30198628 | GGAGGAGCACAGGGAGGGGCG | + | 6.05 |
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| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_02970 | chr20:30198290-30198767 | Bladder | SE_23092 | chr20:30198143-30200173 | Colon_Crypt_1 | SE_23905 | chr20:30198313-30199277 | Colon_Crypt_2 | SE_24856 | chr20:30198129-30199158 | Colon_Crypt_3 | SE_27857 | chr20:30191494-30200969 | Fetal_Intestine | SE_28873 | chr20:30191441-30200905 | Fetal_Intestine_Large | SE_31829 | chr20:30198270-30199761 | Gastric | SE_33920 | chr20:30198212-30200846 | HCC1954 | SE_34238 | chr20:30189210-30201146 | HCT-116 | SE_34664 | chr20:30188903-30201189 | HeLa | SE_38269 | chr20:30190026-30200015 | HUVEC | SE_41187 | chr20:30198022-30199309 | Left_Ventricle | SE_42444 | chr20:30198233-30199786 | Lung | SE_47160 | chr20:30189148-30200294 | Panc1 | SE_48882 | chr20:30198252-30199227 | Right_Atrium | SE_50279 | chr20:30191498-30200037 | Sigmoid_Colon | SE_52484 | chr20:30191540-30200981 | Small_Intestine | SE_54437 | chr20:30197753-30199818 | Spleen | SE_55719 | chr20:30198018-30199221 | u87 | SE_57184 | chr20:30198195-30200129 | VACO_400 | SE_57391 | chr20:30198295-30199172 | VACO_503 | SE_67492 | chr20:30198018-30199221 | u87 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | ATGTTGCCCA GGCTGGCCTC GAACTCCTGA CCTCAGGTGA TCAGCCCTCC TCAACCTCCC 60 AAAGTGCTGG GATTACAGGC GTGAGCCACC ACACCCGACC CATGCCAGTC ACTCTTATTG 120 AGCACCAGGA ACTGCCAGCC AGAGAGAGCT CCCTGCTGCC CAGTGTCACA CACAGCAGGG 180 CTTCCTGGTG GCAGGCAGGT CTCACATCCT AGCATGGCTG CCGGAAAGAA AGGAGGTGAG 240 TCACAGGGCC AGGCCAGGAG CTGGGCGAGG CTGGGGCCAG GGTCCAGGCA GGCGCCACTT 300 TCCAGGAAAG GGAAGGGAAG AGGAAACCAG AAGGCCAGGA GGAGCACAGG GAGGGGCGAG 360 GGTGCCCTTA TCTCCCTGGA CCTGCCCTGG CTGGTGCTGC TTCCTGCTGC AACTCTTGCA 420 AAACCTCGTT CCCAACGCTG TCCTCAAGCA GGGTGCCCCA GGCCAGTACA GGGTTGCATC 480 AAGGCCTTGT GCAAGGGGGG TTAAAGGGAG GACAGTGGCT GGGAGCAAAG GCAGGGCAAG 540 AGGCAAGGCA AATGCGGGTT CTAGGCCCAG TGCCACTTCT GGTTGGGCAC CTGCTTCACC 600 TCCTGGGCTC TTAGGATCCC CAGCATTTTT TTTTTTTTTT TTGAGACGGA GTCTCACTCT 660 GTTGCCAACC TCTGCCTCCT GGGTTCAAGC AATTCTCCTG CCTCAGCCCC TCCAGTAGCT 720 GAGTCTACCG GTGTGCACCA CGACGCCCAG CAATTTTTGT ATTTTTAGTA GAGACAGGGT 780
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