| Tag | Content |
|---|
EnhancerAtlas ID | HS006-20176 |
Organism | Homo sapiens |
Tissue/cell | Astrocyte |
Coordinate | chr19:47582350-47583890 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr19:47582739-47582758 | CCTCCAGCAGGGGGCAGTC | + | 6.71 | | IRF1 | MA0050.2 | chr19:47582631-47582652 | TTTTACTTTTTTTTTTTTTTT | + | 6.16 | | IRF1 | MA0050.2 | chr19:47582598-47582619 | AAAAAGAAAAAAAAAGTAATT | - | 6.19 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_23136 | chr19:47582715-47583742 | Colon_Crypt_1 | | SE_25954 | chr19:47582697-47583615 | Duodenum_Smooth_Muscle | | SE_27626 | chr19:47582827-47583770 | Fetal_Intestine | | SE_28544 | chr19:47582800-47583775 | Fetal_Intestine_Large | | SE_31552 | chr19:47582626-47583625 | Gastric | | SE_52381 | chr19:47582688-47583682 | Small_Intestine | | SE_65381 | chr19:47582384-47583739 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I047078 | chr19 | 47582201 | 47583791 |
|
Enhancer Sequence | ATCTCAGCTC ACCGCAACCA CCGCCTCCCG GGTTCAAGCG ATTCTCCTGC CTCAGCCTCT 60
CGAGTAGCTG GGATTACAGG TATGCACCAC CTTGCCTGGC TAATTCTGTA TTTTTAGTAG 120
AGATGGGGTT TCTCCATGTT GGTCAGGCTG GTCTTGAATT CCCAACCTCA GGTGATCCGT 180
CTGCCTCGGC ATCCCACAGT GGGGGGGTTA CAGGAGTGAG CCACTGCGCC TGGCCAGACG 240
CCACTTCAAA AAAGAAAAAA AAAGTAATTT CACCTGTTTC TTTTTACTTT TTTTTTTTTT 300
TTTAATGTGG CTACTGGAAA ATTTTAAATG AATGATGTGA TTCTGTGGTG CTCCTGTGGG 360
CAGCACTGGC CTGAAGCACA AACCTGGAGC CTCCAGCAGG GGGCAGTCCT CAGTCAGAGA 420
TCAGTGAGTC CTCCCAAGGA GCCGTGAGGC CTGACTGGCC ACTGCTTCCC CTGTCAAACA 480
GCTCAGACCC TAGGTATGTA CTGATTACAT AACCCTGGGG CATGCCAGGC GCTGTGGCTC 540
ACACTTGTAA TCCCAGCGAT TTGGGAGGCC AAGGTGGGCG GATCACAAGG TCAGTAGTTC 600
GAGACCAACC TGGCCAACAT GGTGAAACCC CGTCTCTACT GAAAATAGCT GGGCGCAGCG 660
GCATGCGCCT GTAGTCCCAG CTACTCGGGA GGCTGAGGCA GGACAAACGC TTGAACCCAG 720
GAGGTAGAGG TTGCAGGGAG CCGAGATTGT GCCACTGCAC TCCAGCCTGG GTGACAGAGT 780
GAGACTCTGT ATCAAAAAAC AAACAAAACA AAAAAACCCT AGGGCAGCAG GCTCCCCGGA 840
GGGACTTGCC TTTTCCTACA GGCGCCCTGC CAACGAGGAA TGGACATTCT CCTACGTCTG 900
CTTGCATGGG GCTTCCCCTG CACCCCTCAC AGGGGTGCCC CTGCCACCAG TTAACAAGAC 960
AGTCACTGAC AGATGGACTC TGGAAGCCGG CAGATGTGCT GATGCCTTGA TCCTTTCCAC 1020
TGTCAAAAAA AATAGCCAAT CTCCTAGAAC CTCCTTGTGA ACTAGAAGGC AGGAAAGCTT 1080
CATTTGAAAG GGCACCAGTT CCCGTACCCA CTCACTCCCC AGATGAATCA GGAAACTCAG 1140
GACTGATGTT TGGGTATTTA ACCCTAACCC AAGGTCCTCA GCCTGACTCC TCAGGGAGGA 1200
CAACTGATGC CAGGATGAGT TTCAAATGTC ACCTGGCTAG TGGGGAAGCC CTGACACCTC 1260
CCCCAAGGGA GCCTTCCCCT TTAGAGACCC CCAACTTCCC TCTATTTTCT CTAATGCATA 1320
ATGGGGGCCC TGAGAGTTGC AAAGAAACGT TTGACTTTTC CACCAAAATA CAATCCTTGC 1380
CTCGTCTTTG TGTATCTTTG GTTTTTTGTG GTCTTTCTTG GAGATGGCGT CTTGCTCTGT 1440
TACCCAGGCT GGAGTGCAGT GGCATGATCA TGGCTCACTG CAGCCTCAAT CTCCTGGACT 1500
CAACAGATCC TCCCACCTCA GCCTCTCGAG TAGCTGGGAC 1540
|
