| Tag | Content |
|---|
EnhancerAtlas ID | HS006-09182 |
Organism | Homo sapiens |
Tissue/cell | Astrocyte |
Coordinate | chr12:53432200-53433020 |
Target genes | | Number: 16 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr12:53432635-53432654 | TTGCCAGTAGAGGGAGGAG | + | 6.05 | | FOXP2 | MA0593.1 | chr12:53432996-53433007 | TTTGTTTACAT | - | 6.14 |
|
| | Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
| SE_00292 | chr12:53431994-53434227 | Adipose_Nuclei | | SE_00927 | chr12:53432772-53433186 | Adrenal_Gland | | SE_01709 | chr12:53432795-53433530 | Aorta | | SE_03289 | chr12:53432526-53433501 | Brain_Angular_Gyrus | | SE_04073 | chr12:53431640-53432344 | Brain_Anterior_Caudate | | SE_04073 | chr12:53432434-53433500 | Brain_Anterior_Caudate | | SE_05063 | chr12:53432288-53433579 | Brain_Cingulate_Gyrus | | SE_06898 | chr12:53432377-53433634 | Brain_Hippocampus_Middle_150 | | SE_07995 | chr12:53431365-53433769 | Brain_Inferior_Temporal_Lobe | | SE_26170 | chr12:53432304-53433782 | Duodenum_Smooth_Muscle | | SE_26816 | chr12:53432618-53433433 | Esophagus | | SE_29628 | chr12:53432462-53433516 | Fetal_Muscle | | SE_31505 | chr12:53432682-53433164 | Gastric | | SE_40690 | chr12:53432542-53433470 | Left_Ventricle | | SE_42222 | chr12:53432606-53433554 | Lung | | SE_47537 | chr12:53432826-53433035 | Pancreas | | SE_48159 | chr12:53432722-53433385 | Psoas_Muscle | | SE_50234 | chr12:53432626-53433529 | Sigmoid_Colon | | SE_51279 | chr12:53432638-53433603 | Skeletal_Muscle | | SE_52572 | chr12:53432577-53433454 | Small_Intestine | | SE_53495 | chr12:53431928-53432506 | Spleen | | SE_53495 | chr12:53432571-53433587 | Spleen | | SE_54694 | chr12:53431643-53433618 | Stomach_Smooth_Muscle |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH12I053038 | chr12 | 53432082 | 53433498 |
|
Enhancer Sequence | CTCATAGTAT GGGAAATAGG TTTTTCACCT AGAAGCCTAA ATAAAAAGGC CTCCAAAATT 60
AGATTTTGAA GAGCAGTGTG TCTCGCACCT GATACCGTGT TAAGAGTTCT TGGGTTGGCC 120
AGGCGCAGGG GCTCACACCT GTAATCCCAG CACTTTGGGA GGCCAAGGCG GGCAGATCAC 180
AGGGCAGGAG TTTGAGACCA GCCTTACCAA CATGGTGAAA CCCCGTCTCT ATTAAAAATA 240
CAAAAAAAAT TAGCCGGGTG TGGTGGCACA TGCCTGTAAT CCCAGCTACT CGGGAGACGC 300
TGAGGCAGGA GAATTGCTTG AACCCGGGAG ACGGAGGTTG CAGTAAGCCA AGATGGCCCC 360
ACTGCACTCC AGCCTGGGCG ACAGAGCAAG ACTCTGTCTC AAAAAAAAAA GAATTATTGG 420
GTTATCTACC TTTTCTTGCC AGTAGAGGGA GGAGTGGCCT CTTTGGAGAA AGTATGAAAC 480
CCTGCCCTTT CCTGGTAGAA CATTTCTTTG ACGGGGAGAA AAAAATCGGA AGGAAATTAA 540
CCAAGGTCAC TACAGAGCGT CATAATCTTT ATTTCCAGCT TGCTTTTCAT GATGGCATAT 600
CCCTACATGG AACTTTTTAG TGGATTTTGT TTGTTTTTTG TATTTTTGTG TGCTGTAGAG 660
GATGTGGAAA GAAGGGCTTC AGGAAGGAAG TCTGGGTTGG GGTGAGGTTA GTTTCCCTCA 720
GTACATGTGG GCACAATTTT CTTCAGCTTA AGGGAAATCT TAGGAGAGGG ACATTGATAC 780
TTTTACTTGC CTTTAATTTG TTTACATTAC TGCCCAAGCA 820
|
