| Tag | Content |
|---|
EnhancerAtlas ID | HS006-09175 |
Organism | Homo sapiens |
Tissue/cell | Astrocyte |
Coordinate | chr12:53272060-53275010 |
SNPs | | Number: 3 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr12:53273885-53273904 | TGCTGCCTCCTAGTGGATG | - | 6.09 | | Foxd3 | MA0041.1 | chr12:53274974-53274986 | GTTTGTTTGTTT | + | 6.32 | | Foxd3 | MA0041.1 | chr12:53274978-53274990 | GTTTGTTTGTTT | + | 6.32 | | RREB1 | MA0073.1 | chr12:53273591-53273611 | CCCCCCACCCACCCCCCACC | + | 6.39 | | RREB1 | MA0073.1 | chr12:53273592-53273612 | CCCCCACCCACCCCCCACCA | + | 9.3 | | SP2 | MA0516.2 | chr12:53274434-53274451 | CCAACCCCCGCCCCCAG | + | 6.12 | | Zfx | MA0146.2 | chr12:53274756-53274770 | CCCGCCTCGGCCTC | + | 6.01 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_23067 | chr12:53272391-53273900 | Colon_Crypt_1 | | SE_23945 | chr12:53272387-53273885 | Colon_Crypt_2 | | SE_26564 | chr12:53260695-53274096 | Esophagus | | SE_34862 | chr12:53272821-53274199 | HeLa | | SE_56286 | chr12:53272670-53274165 | u87 | | SE_57699 | chr12:53272845-53273859 | VACO_503 | | SE_64566 | chr12:53266900-53273597 | NHEK | | SE_65517 | chr12:53272588-53274254 | Pancreatic_islets | | SE_67099 | chr12:53263476-53274484 | H2171 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr12 | 53273972 | 53274400 | | chr12 | 53272075 | 53274235 | | chr12 | 53272616 | 53273317 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH12I052878 | chr12 | 53272285 | 53274184 |
|
Enhancer Sequence | CATCTGTGGT CCCAGCTACT CAGGAGGCTG AAGTGGGAGG ATCACTTGAG CTTGGGAAGT 60
TGAAGCTGCA GCTGCAGTGA GCCTTGGTCA CACCACTGCA CTCCAGCCTG GACAACAGAA 120
CGAGACCCTG TCTGGAAAAA AAAAAAAATG CAGCTCTCAC TGGGACTTCT GGGGGCTGAC 180
TCTGCTCTGC TTCCTGACAT GAGTGCTGGT AGCATGATCT GTTCAGTTTG TGAAACTTCA 240
TCACACTGTA GACTTATGAC TTGAGTACTT CTCTCTATGT ATGTTACACT TCCATGAAAA 300
TTGTTTTTGT TTTAAATAAA TCTCCCCGTG TGTATGAAGC TCCACATCTT TCTGGGTTGG 360
TGTGCACATG TCTGTCTGTG CCTGTCTGTA CCTGTCTGCG CCTATGCACA TACAATCTCC 420
CATAGGAATT ATTCCTTGTC TCTGGTGCCT GAGGCCCTCC ATATGTGCAC CTGACAGTAC 480
ACACACGCGC ACACGCATGC ACACACCCAC AGCCCCCTGC CTGCGTGTCT TCCCTCCATG 540
ATGGCAAGGC TGCCGCTGCA GAGGGTGGGG AGGGAATGTA GTAAGGCCTT TCTTTCATTT 600
AACAGCAGAT ATTTACAACC ATCTGCTCTG TGCCAGGCAC GGGGATACAG AAGCATTCCA 660
GTCAGACTGG GCCCTGGCCA AGCTCACCGT CTGCTGGGGA GGCTGTGGTG TGGTGAGAAG 720
GGCCCTGTGG GGTAGCACAG GGTAGGGGGA GCCCAGCCTC GGAGGGGCAG GGACGGCTTC 780
CAGAGGAGGA AATCCTAACT AAATTGGGAA GATGAAAGGC TCACAAGTGG ATGGGTCAGC 840
CATAGGAGGT GCATTGCAGA CAGGGGGACA GCAGGCACAG GGGCTAAGGG TGTGAGGGGG 900
TGCGACTTCC TCAGGGAACC CCCAGGGGAT TCAGCTGCCT GAGTGGAAGG CCACGGCAGA 960
GGTGACTTCA GCGGGGTCAG GCGGGCCTGG AGTGCCAAGC TCAGGGGCTT GTGTGTCTCC 1020
AAGGAAGGGT TTGGGCCAGG CTGGGACATG ATTGGGATCA ACTGGAAGGA GTGCTGTGGA 1080
GGAAGGCGCA CTGAACTGAG AGTGAGGACA CGGAAGTTCT CACCCTGGCT CTGCCCGATG 1140
CTGCCCAACT CCCCTCTCTG AGCCTCCAAA ACGACAGCGT GCTGCACCTC GGAGCCGCTG 1200
GCTCACAGGC GGCTGCTTTC TCCTGGGGCC TGTCTGCTGC CGGCTTGCCT GTCCTCCTGG 1260
GTCCTGCCCA CGCGCTTCTG CCCCCAGGCC CGTGCAGGCG TGGACCTCCC GCGAGGGCCT 1320
CAGCAGTCTC CAGGACAGAG AGTGGAACCC GCCACCTGCT GGAAAGGCCG GAGCCGGCGC 1380
AGAGCTAGCG CGGGGCAATG TGGCGCCCTC TGCGGGGAGC CCCTGCTGCC TCGCGCCGGC 1440
ACTCAAACCT CCAGTACACA GTGCAGTGGA GGGCACACCA GCAGCAGCAC GCCTGTCTCA 1500
CCCTGCTCCT CAGTGCCCTC CGCCCTCAGC TCCCCCCACC CACCCCCCAC CATGGCCCCT 1560
GCGTTGCCAA GGGCACAGGG CATAGGAGGA CGTGGACTGA TCCACCCCAA GCTCCGCTCA 1620
CCAAGTCATG CCCTAGCCTA CATTTCCCAT GAGGATGGGA GCTTCCTCTG ATTTGCACAA 1680
AGCCCCCCTG TCGGTTAGTG GTGGCCTGCA ACCCAACAAC CTCCCAAGTC AGCCTCCTGG 1740
GATAGGGAGG ATGTAGTGAG GGGGTGGGAG GGTGTGCAGG CTCGGCTTCC AGAAGCCGGG 1800
AGAGCAGTTT CTTTCCCTGC TCCTCTGCTG CCTCCTAGTG GATGTCTGAT GTCTCTCCGG 1860
TTTGCACAAA TCCATCCCGC TTCGGTCAAT CCTAGCCGTC TTGGTGCCCA TTCTTCAGAA 1920
GTTCAAGCAG GCTGACAGCA GGCTGCAGGG AAAGAGGATA ATCTACGGCT GCCCACGCTT 1980
CTCTGTGTCC CTTGGGTCCC CAGCACAGCA CTGTCCCCCA GTGCCAATAC TGGATTCTCA 2040
AAGTCTAGAA ATGAAGGCAG AAGCTGGTGT TGGAGATTTT GCCCCTTTAA TCAGCTGCAC 2100
CTCAATCCCC TCTGTGCTGG CTCAGGTTCT TATGCTGCAG GAATCAAGGC GAGCCTTGCC 2160
TCTCTGGCCT CGGTCTCTCT GCTGTGTTTC CTGTGGCTTG TTTGATTTTG TTCAGGACAG 2220
GTTGTTTTGT TTTGTTTTGT GTGTTTTGGG TTTGTTTTTT TTGTTTTGTT TTTTGGCTTT 2280
TTGTTTGTCT GTTTCGAGCC AAGGTCTAGC TCTGTCACCC AGAATGGAGT GCACTGGCAC 2340
GATCTCTGCT CAATGCAAAC TTTGGCATAC CCCCCCAACC CCCGCCCCCA GTCAAGTGAT 2400
CCCAAGTAGC TGGGACCACA GGCATGCACC ACCACCCCCG GGCGTGTGTG TGTGTGTGTG 2460
TGTGTGTGTG TCTCAGGGTC TCACTCTGTC ACCCAGGCTG GAGTGCCATG GCGTGATCTC 2520
GGCTTACTGC AACCTCTGCC TCCCAGCTTC AAGCGATTCT CCTGCCTCAG CCTCCTGAGT 2580
ATCTGGGATT ACAGGTGTGT GCCACCACAC CCAGCTAATT TTTTGTGTTT CTGGTAAAGA 2640
CAGGGTTTCA CCATGTCAGC CGAGCTAATC TCAAACTCCT GACCTCAAGT GATCTGCCCG 2700
CCTCGGCCTC CCGAAGTGCT AGGATTACAG GCATGAGCCA CTGCGCCCGG CCCCAGCAAT 2760
TTTTTTTTCC TTTGGTGGAG ATGGGGTCTA GCCATGTTGC CCAGGCTGGT CTCAAATGCC 2820
TGAGCTCACG CAATCTGCCT GCCTCTGCCT CTCAAAGTGC TGGGATTACA GGCATGAGCC 2880
ACTGCACCCC CAGCCATTTT TTCTTTTGTT TTTTGTTTGT TTGTTTGTTT TTTGTTTTTG 2940
AGACAGAGTC 2950
|
