Tag | Content |
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EnhancerAtlas ID | HS006-03593 |
Organism | Homo sapiens |
Tissue/cell | Astrocyte |
Coordinate | chr1:223936820-223938590 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr1:223937013-223937032 | CGCTGCCACCTGGTGGCCG | - | 8.24 | RREB1 | MA0073.1 | chr1:223938178-223938198 | ACCCACCCCAACCCCATCCA | + | 6.68 |
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| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_00224 | chr1:223934158-223937983 | Adipose_Nuclei | SE_01908 | chr1:223935156-223937517 | Aorta | SE_02306 | chr1:223935517-223937238 | Astrocytes | SE_04026 | chr1:223935516-223937349 | Brain_Anterior_Caudate | SE_05036 | chr1:223935985-223937127 | Brain_Cingulate_Gyrus | SE_05972 | chr1:223934663-223937571 | Brain_Hippocampus_Middle | SE_07159 | chr1:223935466-223937127 | Brain_Hippocampus_Middle_150 | SE_07996 | chr1:223935109-223937042 | Brain_Inferior_Temporal_Lobe | SE_24051 | chr1:223936159-223937066 | Colon_Crypt_2 | SE_25230 | chr1:223936038-223937178 | Colon_Crypt_3 | SE_26209 | chr1:223934955-223937096 | Duodenum_Smooth_Muscle | SE_26925 | chr1:223935278-223937175 | Esophagus | SE_31491 | chr1:223935283-223937172 | Gastric | SE_34545 | chr1:223936173-223937185 | HCT-116 | SE_37129 | chr1:223934990-223937353 | HSMMtube | SE_38254 | chr1:223934520-223937640 | HUVEC | SE_41495 | chr1:223935110-223937269 | Left_Ventricle | SE_42269 | chr1:223934542-223937274 | Lung | SE_45872 | chr1:223935399-223937657 | Osteoblasts | SE_49408 | chr1:223935446-223937062 | Right_Atrium | SE_50365 | chr1:223934678-223937079 | Sigmoid_Colon | SE_53249 | chr1:223935441-223937088 | Small_Intestine | SE_65644 | chr1:223934516-223937226 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 223937496 | 223937546 | chr1 | 223937398 | 223937481 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I223746 | chr1 | 223934513 | 223937570 |
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Enhancer Sequence | GGAGGTAACG GCCGGCGCGG ATGTGCAGGG GTCCTGCTGT CCTGACACGA TGGCCACAGG 60 CACAGTTTGT GGTGATGCCC AGGGGCCCGC GCGGCCCCAC GGTGGTCCAG TTTACACTCG 120 GGCCCCGCAC TCCTGAAGTT CCGCGCGGGA GGAGAAGGGC GTCCCTTTCG CAGCTCGGGC 180 GCCGGGTGCG CCGCGCTGCC ACCTGGTGGC CGCAGTGGCC GGCGCCAGGG GCCCTGGTTT 240 TACTTGTTTT AGATGTTACC CTGTTTTACA GTTACAACCT TACTATTTTG ATAAGCTAAA 300 AATAATAAAA CAATGCATCT TCATAGTGTT TTATACTCTA TAAGGTGCTT TCTCTTTTGA 360 TCTCGTAAAA GTATTCGTGC CCATGTTCAA ATCTGACTGC CTCTTACCAG CTGTGTGGCC 420 TGGGCCAATT ACTGGAACTC TCTGTCCCTT AGTTTCCTCA TTTAAAAAAT GGAAATAATG 480 ATAATATCCA TTGGAAGGTC GTGGCGATTC AATCAAGTTA ATATATGTAA AGTGCTCAGA 540 GGTGACTCAC ACATCATATA TAAGGAGGTA GCTGTCCTTG CTGTTGTGAT CACTGTTGTT 600 ATTGAAAATA TTATGGGCTG ACATGGTGGC TCACACCTGA AATCCCAACA CTTTGGGAGA 660 CCGAGGTGGG AGGATCACTC GAGCCTAGGA GTTCAAGACC AGCCTGGGCA ACGTAGCAAG 720 AACCTGTCTC TACAAAAAAA AGTTAGCTGG GCATGGTGGC ATGCCACTGT CGTCCCAGCT 780 ACTCGGGAGG CTGAGGTGGG AGGATCACTT GAGCCCAGGA GGTCGAGGCT GTAGTGAGCC 840 ATGATCATGC CATTGCACCC CAGCCTCAGC GACAAAGTAA GACCATGTCT CAAAAAAAAA 900 ATTATCAAGC AACTCAAGTT CACTGTTAAT TACAGAACCC AGTCTAGACC GCAGATCTTC 960 TGCATGTCCA GTGTTCTTTT TTTAACCTTG ATTTTTTTAA CTACCCCCTC ACACACACAC 1020 GTCTTTTTAT TTGAAAATTT TCACGTATAC AGAAAAGTTG AAAGACTAAC ATAATAACTA 1080 TCCAATTGCC ACTCCCCTAG ATTCACCGAT TGCTAACATT TGCCATGTCT GCTTTATCTA 1140 TGTGTGCACT TTTTTTGAGC CATATGAAAG TAAGTTGCAG ACGTTATGAC ACTTCCCTCC 1200 TCAATACTTC AGCATTTATT CCCTATGAAT AAGGACATTC TGTTACATAA TTCCTCTACT 1260 GTTGCCACAC CTAAGAAAAT AACATTAATT CAGTAGTGTC ATCTATTATA AAGTCTATAC 1320 TAACATTTTC CCAGTTGCCC AAAATGTCCT TTCTGGCGAC CCACCCCAAC CCCATCCAGG 1380 ACTCAATCCA GATTCACTCA CTGCATGTGC CTGTTATCAC CAGTGATCTT TCAACAAATG 1440 GTAAAGCTTC TCTGAGCTCC TTTACCAAAA GCGCATCCTG TCAGTTAAGC TGAAGTTCAG 1500 AGATGAAGCA CCAACAGCCC CATCCTCGAG AGCCGGATCC TGGGAGCTTT AAATCTCATT 1560 TTCCAAAGCT AGGCAGCAGT GAGAGGTCTG GGTGCCAAGC CCCCTCTAGC TCTTGTGATC 1620 CTCCCTCATA CATGGACTCA ACCCCCAAAT CCTCCCCACC GTCCTCAGCC CCATACCTCC 1680 TGGCTCATGC GGAAGGGGGT TGGAGGCCCA AGCCTTCATA GCCCTGACTT GAACTCAACC 1740 TCTTACTCCT CCCTTTTATC TAATCCTGCA 1770
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