Tag | Content |
---|
EnhancerAtlas ID | HS006-00676 |
Organism | Homo sapiens |
Tissue/cell | Astrocyte |
Coordinate | chr1:28188790-28190690 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
REST | MA0138.2 | chr1:28189973-28189994 | GCCAGCAGCATGGACAGAGTT | + | 6.19 | RREB1 | MA0073.1 | chr1:28189396-28189416 | CCCCTCAACAACCCCCACCT | + | 6.23 | TBX20 | MA0689.1 | chr1:28189615-28189626 | CTTCACACCTA | - | 6.62 | ZNF263 | MA0528.1 | chr1:28189043-28189064 | CCCACTCCCCACCTCTCCTCC | - | 6.09 |
|
| Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
SE_09233 | chr1:28184358-28193418 | CD14 | SE_20343 | chr1:28188941-28190507 | CD56 | SE_50884 | chr1:28188571-28191330 | Sigmoid_Colon | SE_53500 | chr1:28188641-28191581 | Spleen | SE_62491 | chr1:28184415-28220281 | Tonsil |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I027862 | chr1 | 28188512 | 28192910 |
|
Enhancer Sequence | CACTGTGGAG GGGAACACAG GAGAGGGGCA GGTTATGGGG AAGGTGCTGA GATTGAGGCC 60 CTTTATGCCG TAGAAATCAG GGCAGATGTG TGCACACCTG GAGCTCAAGA CTGGCCTGGA 120 CACAGGCTTG GAAGCGGGAC AGGGTGAGGC CACATCCCCC ACATCGGGGA GGATGATTCT 180 GAGGACTTCT ACTTACAAAA CTGTAAGAAG AGGGGGCTCA GGTGGCAGGG TTTCAGGGAA 240 GGGCAGAGGG TGGCCCACTC CCCACCTCTC CTCCTCTCTC TGTCCTCTGG GCGGTCTCTA 300 GGTCTCCACT GGCCCCTGCA GCCCCCAGTG GCTGGAATCA CTCCCTTGGA GAGAGACCTC 360 TAAACTGACT GCTCCAGGCT TCCTTAGAAA GCAGGGAGGA GGCCCCCCGC ACAGATGGCT 420 GCAGCAGTAG CCCCTCTGGA ACCCAGCACC CACCTGGAGG GGATGACAGC ATGGACCTGG 480 GACTCAGGCC CTAGTTATTC TGGTAAGGCT CAGGACTGGG CCTGAGGCAT GTCGCAGTTC 540 ACATGGTCCC AGCAGGGCTG CAAGCAAGTC CAGCATAGCC TGCTGGGCTC CTTTCCCCGC 600 ACATGGCCCC TCAACAACCC CCACCTTGGA CCCTGAGCAG AGCGAGAAGC ACCTTGCCCA 660 GACAGGAGAG ATGAGCCCCT TCACCTAGAC CCCACGGGCT TCGCCCCTCA CTCCATTCTG 720 CCTCCTACCT GCCTCTCTTC TCAGCCTTCC AGGCTGGGTT TCCATCCTCT CCTCTGAGCA 780 ACCTCACCAG CCTCCTAACT GCCCCTCCCT GCCCTGCCAA GCCATCTTCA CACCTAATGC 840 AGTTCACACC ACATCACTCA TTTGAATCAA TCAAGAACTC TTCCCCAAAG AGCAAACTCC 900 TTACTGAGGC CTCTGGGGTC CCGCATGCCT GGCTGCTCTC TGCCTCCTAC TCGAAATCTC 960 TTTCAGTTCC CCAGTATGCT CTCCTCTGTT CTTCCCTCTC GCTCTGTGTC CCACTCACCC 1020 TTGACTCACC CATGACTTCC TCTGGGCATG CTTCCCTAGT CCTCAAGCTG TGGAAAGAAG 1080 ATCTGCTTGA GCAATCCTCA CACCCTATGT CCTGCCTGTG TGAGTGCTGG GAGGACACTC 1140 ACCACTGTTT CCTGGCAACC CCACAATGTG CCCTAAACAG CAGGCCAGCA GCATGGACAG 1200 AGTTGAATTG AAATGCATTA AGAAGCTCCT TCTTCCTTTC CTCTCCAGGT CCTTGGATCC 1260 TGCCCCATTA GGTGGGCAGG TATTATTACC CTCTGCTGTG GTTTGAATGT GTCCTCCAAA 1320 TTTCAGGTGT TGGAAACTTA ATCCCCAAAT TCTTATGTTG ATGGCATTTG GAAGTGGAGC 1380 CTTTGGGAGG TATTTAGGAT TAGATCAGGT CATCAGGGTG GGGCCCCCAT GGTCACCCTG 1440 GTGGCTTTAC AAGAAGAGGA AGAGACGCCT GAGTTGACAG GCTCTTCCCT CTCACCATGT 1500 GATGCCCTCT GCCATGTTAT GATGCAGTGA GAAGGTCCTC ACAAGCTGCA GCCCCTCAGC 1560 CTTGGACTTC CCAGCCTCCA AAACTGTAAG AAATAATTTT TTTTTTTTTT TTTGGAGACA 1620 GAGTTTCACT CTTGTTGCCC AGGCTGGAGT GCAATGGCAC AATCTCAGCT CACTACAACC 1680 TCTGCCTCCT GGGTTCAAGC GATTCTCCTG CCTCAGCCTT CCGAGTAGCT GGGATTACAG 1740 GCATAAGCCA TCACACCCAG CTAATTTGTG TATTTTTGGT AGCGACGGGG TTTCACCATG 1800 TTGGCCAGGC TGGTCTCGAA CTCCTGACCT CAGGTGATCC ACCCGCCTTG GCCTCTTAAA 1860 GTGCTGGGAT TACAGGCATG AGCCACCGTG CCTGGCCAGA 1900
|