EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-42865

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr7:116399540-116400970

Target genes

Number: 10
Name	Ensembl ID

CAV1	ENSG00000105974
AC006159.5	ENSG00000235427
AC006159.4	ENSG00000243220
AC006159.3	ENSG00000231210
MET	ENSG00000105976
CAPZA2	ENSG00000198898
AC002543.2	ENSG00000235945
Y	ENSG00000252115
ST7	ENSG00000004866
TPM3P1	ENSG00000213050

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GFI1	MA0038.2	chr7:116400165-116400177	GAAATCACAGCA	+	6.22
Gfi1b	MA0483.1	chr7:116400166-116400177	AAATCACAGCA	+	6.62
Nr2f6(var.2)	MA0728.1	chr7:116400049-116400064	TGAACTCTTGACCTC	-	7.64
RARA	MA0729.1	chr7:116400046-116400064	TCTTGAACTCTTGACCTC	-	6.45

Enhancer Sequence

AGTGGTAAGT CCTTTGAGCA ATGGTTCTAC TCAGAGCTCT GCATCTTTGC CTCTAACCAT 60
GTGGCTTTCA TGGTACCTGA GACATCTCAG TTTCGCCTTT AAGGTTTGCT AGTTAATTTC 120
CTTGCAGTGT AGCCAAGTAG TATTTTTTAT TTAATAACTG AAATTATCTA GAGTCTTGGG 180
CTAACCATGT GGAAAAAATA CATACACATA CACACATGCA CATATAATGT TTAGACAAGA 240
ATGAAGATTA CCAATTTGAG ACAGTGTTTT TTTATGTTTG TTGGTTGGTT GGTTTTGAGG 300
GTTTTTTTGA GACAGTATCT CACCCTGTCA TCCAGGCTGG AGTGCAAGGG CACGATCTCA 360
GCTCACTGCA ATTTCCCCCT CCCAGGTTCA AGCGATTCTC CACCTCAGCC TCCCAAGTAG 420
CTGAGACTAC AGGCACGAGC CATCATGCCT GGCTAATTTT TGTATTTTTT GGTAGAGACG 480
AGGTTTCACC ATGTTGGCCA GGCTGGTCTT GAACTCTTGA CCTCAAATGA TCTGCCCACC 540
TCGGCCTCCC AAAGTGCTGG GATTACAGGC ATGAGCTACT GTGCCTGGCC TGAGGCAGTG 600
TTTTTACAGA CAGTCAGTAC AAATGGAAAT CACAGCATTT CCCTAGTCCC TTTTTAATGT 660
GTCATAGAAC ATGGACCCTT TTGCTCTAAT AAAATCCTTG GAAAAGGTTG CTGATCTTGC 720
AGCAGTATTC TTGCATTTCT AAGCAGCTGA CGTATGCTTT CTTACAGCCC CCTGTTCTTC 780
TTATCATTCT TCTTGTCCCT TTGTTAGCTC TTTCTTGAAA GAGCTAACAA AGAAAGAGCA 840
TTAGAATATT TATGTTATGT CCTAAAGTGT GAATGTTATT TGCTGTTTCT CCACCTATCC 900
TTATTTTATA TAGGTCACAT TAAAGTGGTA GTTTTAGTTT AGACCTTAGA AAGCTTGGAG 960
TTATTTCCAA AGATTCCATA CATTTTGTTG ATGTTTTTCT CTAATATAAA ATACCATAAT 1020
CTAGTAGGAC TTGAGCACTC AACTCAGAAT GAAAGTTCTA AGTGCTCTTG CTCAAGCAAG 1080
GTCTTGATTG GTCAGGTGAT AGATTGAATT ACAGCACTTC CTTTTAGATT CTCCATCCAA 1140
TATTTCTTGA AGACTAAAGC CACAATGTTC TTTAATTACA AAAACCAATT TGGGGCTAAA 1200
AATGTCAAGC CAAATCACCA AATAATAAGG TCATTTCAAA TAAGATTTTT CTTGGCCTTC 1260
TCAATCAGCC ACATTGCATC ACCTCTAGAG AGTATTATTA GATTTTTATC ATATTCCTGA 1320
GAGATTGTAC TCTAGGGAGT CACCATATGA AGCAAAGCAT TTTGAAACCA ATCCCCACAC 1380
ATGGCCACAA ACAAAGTTAG AGTACCACTG CTATTAATTT AAAGGACATC 1430