Tag | Content |
---|
EnhancerAtlas ID | HS003-36295 |
Organism | Homo sapiens |
Tissue/cell | A549 |
Coordinate | chr5:39177330-39179040 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
JUN(var.2) | MA0489.1 | chr5:39178427-39178441 | AGTAGATGAGTCAT | + | 6.1 | Sox6 | MA0515.1 | chr5:39177749-39177759 | CCATTGTTTT | + | 6.02 |
|
| Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
SE_09267 | chr5:39174591-39181164 | CD14 | SE_11853 | chr5:39174232-39181202 | CD3 | SE_14412 | chr5:39174231-39180904 | CD4_Memory_Primary_7pool | SE_15414 | chr5:39175832-39180040 | CD4_Memory_Primary_8pool | SE_15892 | chr5:39176540-39179571 | CD4_Naive_Primary_7pool | SE_16346 | chr5:39174130-39179633 | CD4_Naive_Primary_8pool | SE_16895 | chr5:39176614-39179675 | CD4p_CD225int_CD127p_Tmem | SE_17328 | chr5:39173104-39220299 | CD4p_CD25-_CD45RAp_Naive | SE_17813 | chr5:39173548-39219105 | CD4p_CD25-_CD45ROp_Memory | SE_18256 | chr5:39172736-39219491 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19181 | chr5:39174220-39181412 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20261 | chr5:39174241-39180939 | CD56 | SE_20838 | chr5:39176203-39179887 | CD8_Memory_7pool | SE_21573 | chr5:39176494-39179926 | CD8_Naive_7pool | SE_21959 | chr5:39173513-39181228 | CD8_Naive_8pool | SE_22332 | chr5:39173005-39220330 | CD8_primiary | SE_25530 | chr5:39174749-39180567 | DND41 | SE_30970 | chr5:39174758-39184202 | Fetal_Thymus | SE_39419 | chr5:39176479-39177824 | Jurkat | SE_39419 | chr5:39177825-39181466 | Jurkat | SE_50934 | chr5:39176723-39178176 | Sigmoid_Colon | SE_53214 | chr5:39176841-39177908 | Small_Intestine | SE_55167 | chr5:39176772-39178732 | Thymus | SE_55167 | chr5:39178836-39180232 | Thymus | SE_60230 | chr5:39146019-39191957 | Ly4 | SE_62247 | chr5:39149212-39220084 | Tonsil | SE_66258 | chr5:39176479-39177824 | Jurkat | SE_66258 | chr5:39177825-39181466 | Jurkat |
|
| Number: 1 | ID | Chromosome | Start | End |
GH05I039173 | chr5 | 39173785 | 39181192 |
|
Enhancer Sequence | GGCTAACCTC CAAAGTTTAT TGTTTCTGTT GCTGCCTTCT TACTATTGTG CGCCTGCTAC 60 CTAGAGAGGA CTCTATTTCC TTGGGGTAAC TAACAAACCA AAGAAGTCCG TAACCTACCT 120 GTTCCTTTAA ATTCACAGAG CTATAGAGCT AGAAGGTATC TCAGGGGTGG TCTAATTCAA 180 CCTTCACATT TTGCAAAATG AGAAGGTGGT CAAAGAAGTT ATTTGTCCCA GGTCTCCCAA 240 AGCTGACAGA GTTGGGCCCA GGACTGAATC TCTTGACATT AAACCTAACC ACATTGCTCA 300 ATGTAATAAC TGCAGGCTGA TTAAGTTCTC TACAACGTAT TGTGCTCAAA CTACTGATTG 360 TCATAGAATC ATTTAGAATG CAAAACTATT TTTTCCCACA GTGAGTTTTA CAAAATTTGC 420 CATTGTTTTA CTTCAAACTT TTGAGCCTCA ACATTTTATA TATGAAATGG CACCAACAAA 480 ATCTGTAACT CTCTTCATTT TCTTTTTCAC GTCCTGGAGA TTGCATGTGT ACGTGTGTAT 540 GCTTTGTGAG ATAAGGTGTC TTGCAGCTCT GGCTTTGAAC AACAAAGTTG CTGAAGCTGT 600 TAGAAGCTGC AAGAATACCC ACTTCCTACT TTACTGGTGA CATATTTTTG CAAAGCTGTT 660 CTCACTCCGC TTCCCCATCT CAAGCAAATT AAGATTTAGA ACAATGACTT TAAGTTCCCT 720 TTTATGCTAC TTCTGCTCTT GTACAGTAAA ATAGCTTTCC TGCGAACACA AAATATTTTC 780 CACCAGTGAA CTAAAATTGT AAGTATTATC TGTTACCTGC ATTGACCTCA TGCAGCATTT 840 CCCCCAAAGT TAATTCCTGT GAACATTGGT CCTACTTAGA TATTTTGGGA GAAAGAACAA 900 AAAGGTTCTG TGGTCAAATA TGATTTGGAA ATTGCTGTGA ATTATACTTT TCCTTTGATA 960 TTCATAGTGT TCATTACTGT CTCAAAGACT TTATAATAAG AGAACTAATT TAACTTTGCT 1020 TAACCCAAGA TTTTCTGAAT GTATTTGAAT CATTTTTCCT CTGCAACATT CATGTGTGAA 1080 CATCCTGCAG AAGGCTTAGT AGATGAGTCA TGATGAGATT ACAGTAGCGT TTATTGAGTG 1140 TGTACTGTAT GCCCTACAGT TTTACAAGCA CTTTAGTGGG ATGATGCCTC TGTCAGGCTC 1200 AAATATCATA GAACAAATTC AGACTCTATA GTCGTCAAAA TGCCCGTGGT TTAATTTTGG 1260 CTGTCCTTCC TATGAATTAC ATAACATTGT ATAAATCACT TAATCTCTGA GCCTCTGAAT 1320 CTTCACTGTA ATATGGGAGA ATAAAGACAG ACTATGAGGT AATGTGGAGA GAGACGAAAA 1380 TAAAGTTACT GGTAAAATAT CCAAATAAAG TGGAAAAACA TGGGCAACAT TGAGGTTTTT 1440 TTTAACTGCA ACAAGATTCA AAAAAATGCA TAAGTCCTCC CATTATGTTT CTGATGACAA 1500 CTGAGGTGAA TTTAAAAAAT CTTTAAAGAA ATATCACCTG GGAAATTAAC ATTGTGTGTA 1560 CTAGACAGCT TCCCCCCAAC ATCTTTTAAC ACATTGCAAT AGTTTTCTGA TAGGTACCGG 1620 ATAATTTTCT TATAATCTTA GGAAATCCTT TATGTTAGGA AACGTATCAT CTTGTCAAGC 1680 ACATAGAAAA CTGGCTGAGT TTGAAAATCT 1710
|