EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-32381

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr3:49217830-49219440

Target genes

Number: 20
Name	Ensembl ID

PRKAR2A	ENSG00000114302
SLC25A20	ENSG00000178537
ARIH2	ENSG00000177479
C3orf71	ENSG00000221883
RP13	ENSG00000235236
P4HTM	ENSG00000178467
WDR6	ENSG00000178252
NDUFAF3	ENSG00000178057
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
AC135506.1	ENSG00000241461
QRICH1	ENSG00000198218
QARS	ENSG00000172053
USP19	ENSG00000172046
LAMB2	ENSG00000172037
CCDC71	ENSG00000177352
KLHDC8B	ENSG00000185909
USP4	ENSG00000114316
GPX1	ENSG00000233276
RHOA	ENSG00000235908

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2F1	MA0017.2	chr3:49219015-49219028	AAGAGGTCAAGGG	+	6.14
Nr2f6(var.2)	MA0728.1	chr3:49219009-49219024	GAGCTTAAGAGGTCA	+	6.27
Zfx	MA0146.2	chr3:49218123-49218137	GAGGCCGAGGCGGG	-	6.01

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I049181

chr3

49218772

49219051

Enhancer Sequence

CTGTCCCAAG AACACCTTCT TGCCTTTGTG CTTGGCTTCT GCCTGCAGAG CCATTCCCTC 60
TCCAGTCACT CAGTTTCTCC TGCTGTAGAC CTGAAGTGGC CAGATCTGGT GAGGTCAGGC 120
TTGGCTGGCT TGGGAGTATA GGTAATGGCT GACAGCAGGT CCCCAGATAA AATACAGGGG 180
CTGGCTCCAT CCCTGAACCA GAATCTTCAG AGTAGAGCTT ATTGTATGTG TGTTTAAGAG 240
TTCCCTTTTT AGGCCAGGTG CGGTGGCTCA CGCCTGTAAT CCCAGCACTT TGGGAGGCCG 300
AGGCGGGCGG ATCACGAGGT CAGGAGATCG AGACCATCCT GGCTATCATG GTGAAACCCC 360
GTCTCTACTA AAAATACAAA AAATGTGCTG GGTGTGATGG CGGGCGCCTG TAGTCCCAGC 420
TACTCGGGAG GTTGAGGCAG GAGAATGGCG TGAACCCGGG AGGTGGAGCT TGTAGTTAGC 480
TGAGATCACA CCACTGCACT CCAGCCTGGG CGACAGAGTG AGACTCCGTC TCAAAAAAAA 540
AAAAAAAAAA AAAAGAGTTC CCTTTTTAGA ACCGCCTGCC TTAGACAGTC TGATGGTAGT 600
CTTCAAGCAG AATGAAAACT CCAAGAAGGT GGGAAGCTTT CATTCCTCAA AATGCAAGCT 660
GAGGCTGGGC ACAGTGGCTC ATGCCTATAA TCCCAGCAGT TTGGGAGGCA GAGGCGGATA 720
GATCACTTGA AGCCAGGAAT TCGAGACCAG CCTGGCCAAC ATGGTGAAAC CTTGTCTCTA 780
CTGAAAATAC AAAAATTAGC TAGGTGTGGT GGTGGGCGCC TGTAATCCCA GCTACTCGAA 840
AGGCTGAGGC AGGAGAATTG CTTGAACTTG GGTGGTGGAG GTTGCAGTGA GCCGAGATCT 900
CACCACTGCA CTCCAGCCTT GGCAACAGAG AGACTCTATC TCCAAGAAAA AAAAAAAAAA 960
AAAAGCAAGC TGAGGCCGTG CAGTGGCTTA CACCCGTAAT CCCAGGACTT TGAGAGGCCA 1020
AGGAGGAAAG ATTGCTTGAG CCCAGGAGTT CAAGACCGGC CTGGGCAGTG TGGAAAGGCT 1080
CCCAGACACT GTCTCTACAA AAAATAACAA ATTAGCCAGG CGTGGTGGTG CATACCTGTG 1140
GTCCCAGCAA CTAGGAAAGC TGAAGTGGAA GGATCACATG AGCTTAAGAG GTCAAGGGTG 1200
CAATGAGCCA TGATCGTGCC ACTGCGAACC AAGCTACAGA CTGGGAGAAA ATATTTATAA 1260
ACCATATATC CAACAGAGGA CTAGAATATA TAAGGAAGTC TCTCAACTCA ACAGTAAAAT 1320
CACAGTCTAA TTAGAAAATG GACAAACATG AAGACATCTA ACCAAAGAAG ATTTACAGAC 1380
GACAAATAAC ACATGAAAAT GTGTCCGGAA TGGGTGGGTT CTTCGTCTCA CTGACATCAA 1440
GACTGAAGCC GCGGACCCTC GCGGTGAGTG TTAACAGTTC TTAAAGGCGG CATGTCCGGA 1500
GTTTGTTCCT TCTGACGTTC GGATGTGTTC CCAGTTTCTT CCTTCTGGTG GGTTCGTGGT 1560
CTCGCTGGCT CAGGAGTGAA GCTGCAGACC TCCGCGGTGA GTGTTACAGC 1610