EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-32374

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr3:49103570-49105400

Target genes

Number: 24
Name	Ensembl ID

PRKAR2A	ENSG00000224424
SLC25A20	ENSG00000178537
ARIH2	ENSG00000177479
C3orf71	ENSG00000221883
RP13	ENSG00000235236
P4HTM	ENSG00000178467
WDR6	ENSG00000178252
NDUFAF3	ENSG00000178057
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
AC135506.1	ENSG00000241461
QRICH1	ENSG00000198218
QARS	ENSG00000172053
USP19	ENSG00000172046
LAMB2	ENSG00000172037
CCDC71	ENSG00000177352
KLHDC8B	ENSG00000185909
CCDC36	ENSG00000173421
RP11	ENSG00000225399
Y	ENSG00000199546
C3orf62	ENSG00000188315
USP4	ENSG00000114316
GPX1	ENSG00000233276
NICN1	ENSG00000145029

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxq1	MA0040.1	chr3:49104513-49104524	AATAAACAATT	-	6.02
NKX2-3	MA0672.1	chr3:49105295-49105305	ACCACTTGAA	+	6.02

Enhancer Sequence

TTAGCCAGAC GTGGTTGTGA GCCAACTGTG GTCCCAGCGA CTCAGGAGGC TGAGGTGGGA 60
GAACTACTTG AACTCAAGAG GCAGAGGTTG CAGTGACACA AGATCATGTC ACTGTACTCT 120
GGCATGAGTG ACAGTGAGAC CTCCATCTCA GAAAAAAATA AGGGTAAGGA AAAAAAAAGA 180
ACCACTACTA TTGGGTTAAA CACATAGTAT GTTTTTAAAT TATAATACGG CTTGCTTAAA 240
ACAAAATGTC AAAAATCTGG TTACTATCAC TGAATCATAG CTCATATGCT TCATGCTTTA 300
CTGTATTTCT TAATTTACTT TACTTTTCTT TTTTTTTTTT TGTTGAGGCA AGAGTCTCAC 360
TCTGTCGCCT AGGCTGGAAT GCAGTGGCGC AATCTTGGCT CACTGCAACC TCCTCCTCCC 420
GGGTTCAAGC AATTCTCCTG CCTCAGCCTC CTGAGTAGCT GGGATTACTG GCACCTGCCA 480
CCCGTGCCTG GCTAATTTTC TTATTTTTAG TTGAGACAAG GTTTCACAAA GGCATGAGCC 540
ACTGCACCCA GATGATTTTT CTTCTTTTAA AATGAGTTAT TATCTGATCA ATTGATTTTT 600
CTTAGAAATC ATTTAAAAGG CCAAGTGAGG TGGGTCATGC CTGTAATCCT AGCATTTTGG 660
GAGGCCAAGG CAGGTGGATC ACCTGAGGTA AGGAGTTCGA GACCAGCCTG GCCAACATGG 720
TTAAACCCCG TCTCTAATAA AAATACAAAA ATTACCCAGA CGTGGTGGTG TGCACCTGTA 780
ATCCCAGCGA CTCAGGAGGC TGAGGTAGGA CAATAGCTTG AACCTGGGGG GCGGAGGTTG 840
CAGTGAGCCG AGAACATGGC ACTGCACTCC AGCCTCATCG ACAGAGACTC TGTCTCAAAA 900
AAAAAGAGAG AGAGAAATTA CTTATCAATG CTCAAGCTTC CAAAATAAAC AATTAAATGG 960
CTAATGTGGC TAATGGCTAT TGTTAGCAGA AATACTAGGG AGTTAGAACC TCCCAATCCA 1020
CCTCCTAAGT GGTGGCACCT GTCCGTCACT CCAGAAATAA ACAAAATTAC AAATAATCTG 1080
ATGTCACTTT ATATCCAAAA TAGTAAGAAT TTAAAATTAG GGGAATAAGA GTTAAGAGTA 1140
AATTTAACGG CTGGGTGCGG TGGCTCACGC CTGTAATCCC AGCACTTTGG GAGGCCAAGG 1200
TAGGCAGATC ACAAGGTCAG GAGATCAAGA CCATCCTGGC TAACATGGTG AAACCCCGTC 1260
TCTACTAAAA ATACAAAAAA ATTAGCTGGG TGTGGTGGTG GGCACCTGTA GTCCCAGCTC 1320
CTTGGGAGGC TGAGGCAGGA GAATGGTGTG ATTCCAGGAG GCGGAGCTTG CAGTGAGCCG 1380
AGATAGCACC ACTGCACTCC AGCCTAGGTG AAAGAGCAAA ACTCTGTCTC GAAAAAAAAA 1440
ACAAAAAAGA AATTAAATGT TATTTATATT ACTTCCCTTC AATTTTTTTA ATTTATATAA 1500
GAGCCAAGCT TTTTCACTGG GTAGAAAATT ACTAAATAAT CATATTAAGA ATCTGGCAAA 1560
AGGCCAGGCG CGGTGGCTCA GGCCTATAAT CCCAGCACTT TGGGAGGCCA AGGCAGGCGG 1620
ATCACGAGGT CAAGAGATTG AGACCATCCT GGCCAACCAA CATGGTAAAA CCCTGTCTCT 1680
CCTAAAAATA CAAAAAAAAT TAGCTCAGAA GGCGGAGGCA GGAGAACCAC TTGAACCCAG 1740
GAGGCAGAGG TTGCAGTGAG CCTAAATCAT GCCACTGCAC TCCAGCCCAG GCGATAGAGC 1800
GAGACTCCGT CTCAAAAAAA AAAAAATTTG 1830