| Tag | Content |
|---|
EnhancerAtlas ID | HS003-24028 |
Organism | Homo sapiens |
Tissue/cell | A549 |
Coordinate | chr19:47628010-47629070 |
Target genes | | Number: 21 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr19:47628651-47628670 | TGTTGCCCCCTAGAGGACA | - | 6.17 | | FOXA1 | MA0148.4 | chr19:47628973-47628989 | AATTGTTTACATAGCA | - | 6.54 | | Foxa2 | MA0047.2 | chr19:47628976-47628988 | TGTTTACATAGC | + | 6.32 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_23136 | chr19:47628103-47628657 | Colon_Crypt_1 | | SE_23866 | chr19:47628281-47628588 | Colon_Crypt_2 | | SE_42396 | chr19:47628105-47628801 | Lung |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I047125 | chr19 | 47628258 | 47629190 |
|
Enhancer Sequence | TGCTGGGATT ACAGGCCTGA GCCACCGCGC CCGGCCAATT TTGTATTTTT AGTAGAGATG 60
GGGTTTCACC ATATTGTCCA GGCTGGTCTC AAACTCCTGA CCTCGTGATC CGCCTGCCTC 120
GGACTCCCAA AGTGCTGGGA TTACAGGCAT GAGCCACCAC GCCCAGCCAG AATTTTTTCT 180
TTTTTCTAGA GAAGGGGGTC TCCGTATGTT GCCCAGTCTG GTCTTGACCA CCTGACCTTC 240
ATTGATTTTC CTACGTCGGC CTCCCAAAGT GGTGGGATTA CAGGTGTGAG CCACTGCCAC 300
CGGCCAGTAA TTATGCTGAT GAAAGACCTG TTTTTTCTCC AGTTCCTGGG ATGGCTCTAG 360
GGAGGGTTAT TTACACTGTG AGTGAGGAGG CATTCACAGA GAAGTTCCTC CAGAGTGTGG 420
AAGAAGCACT ACCATTTGGC ACCAACGCCT GGAGAACAAA GGAGGAGACC ATTGGCCAAA 480
GAGAGGCATT TCCATTTTGT TGGAACCTGC TGACCACCAA CCCATAGCAT TTTTTCCCTT 540
TCTTCCTTGC TAATCCAATC GCAGATTCAT TGAGGAGGTG AGAGGTCCTG AGATCCAGGC 600
TGGAAGAGGA GTGATTGGTC TACCTGGTTC TCAAGGGATA ATGTTGCCCC CTAGAGGACA 660
TTTTGGAAAT TATTAAGGAA AATTAACGAC TGGTTTTTTG GTTGTCATCT GGTTCTCAAG 720
GGAACAGTAT TGCTTCCTTG GGAGAATTTG GAAACTTACC TTTTTTCATC GTCACAATGG 780
TGAAGGGTTT GTTACTGGGA TTAGAGGACA AGGACCAGAC ATGCCAAGAT GTTCTACAAT 840
ATAGCATTCC TAATTAATAA TCACCTAATG AATAAAGCTC AGATAGCACT TAAAAAGTGG 900
GGAAAGGACT GTTTATACTA AATTATGCTA AGCTGTAACA CTGAACTATT CCAGTTCTTT 960
TGAAATTGTT TACATAGCAA AATCATAGTT GACTCCTGGC CATTTAAGAC TTATGCCACC 1020
ACTCTTGGGA TAGTGAAAAT GTTTTGCAAC TAGATTGAGG 1060
|
