EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-23436

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr19:40420540-40421090

Target genes

Number: 20
Name	Ensembl ID

PAF1	ENSG00000006712
MED29	ENSG00000063322
DYRK1B	ENSG00000105204
FCGBP	ENSG00000090920
AC007842.1	ENSG00000187534
PSMC4	ENSG00000013275
ZNF546	ENSG00000187187
ZNF780B	ENSG00000128000
ZNF780A	ENSG00000197782
AC118344.2	ENSG00000221051
AC118344.1	ENSG00000205041
MIR641	ENSG00000207631
AKT2	ENSG00000105221
U6	ENSG00000206674
Y	ENSG00000206925
C19orf47	ENSG00000160392
PLD3	ENSG00000105223
SERTAD1	ENSG00000197019
SERTAD3	ENSG00000167565
BLVRB	ENSG00000090013

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2A	MA0052.3	chr19:40420662-40420674	TCTATTTTTAGT	-	6.27
MEF2B	MA0660.1	chr19:40420662-40420674	TCTATTTTTAGT	-	6.32
MEF2C	MA0497.1	chr19:40420661-40420676	TTCTATTTTTAGTAG	-	6.57

Enhancer Sequence

AGTGCAGTGG CACAATCTTG GCTCACTACA ACCTCTGCCT CCTGGGTTCA AGCGATTCTC 60
TCTCAGCCTC CCTAGTAGCT GGGATTACAG GTGTGAGCCA CTGCACCTGG CTAATTTTTT 120
TTTCTATTTT TAGTAGAGAG GGGGTTTCAC CATGTTGGCC AGGATGGTCT CAAACCTCAG 180
ATGATCCACT CGCCTCAGCC TCCCAAAATG CTGGGATTAC AGGCGTGAGC CACGGTGCCC 240
AGCCACTAGC TTCCTTTTTA AAATAGAGAC AGGGGTCTCA CTCTGTCACC CAGGCCAGAA 300
TGGAGTGGCA CGATCATAGC TCACTTCCTA GCACTTCAGG AAGCTGAGGC GGGAGGGTCA 360
CTTGAGCCCA GGAGTTGGAG ACCGGCCTGG GCAACTTAGT GCGACTCCGT TCTGCACAAA 420
AAGGAAAAAG GAAAACGAAA AAAATAAAAT CTTCTAACAG GCCTCCCCCA CCCTCAGGCC 480
CATCCAGAAC TCCAAGTCTT CAGAGGGTAT TTCCTGCTCC GTCACCCAGC CCTGGGCGCC 540
ACGTCGCTCA 550