EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-22494

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr19:10416630-10418860

Target genes

Number: 21
Name	Ensembl ID

PPAN	ENSG00000130810
SNORD105	ENSG00000209645
P2RY11	ENSG00000244165
DNMT1	ENSG00000130816
MRPL4	ENSG00000105364
ICAM1	ENSG00000090339
ICAM4	ENSG00000105371
ICAM5	ENSG00000105376
ZGLP1	ENSG00000220201
FDX1L	ENSG00000167807
RAVER1	ENSG00000161847
ICAM3	ENSG00000076662
TYK2	ENSG00000105397
MIR1181	ENSG00000221566
CDC37	ENSG00000105401
PDE4A	ENSG00000065989
KEAP1	ENSG00000079999
KRI1	ENSG00000129347
ILF3	ENSG00000129351
QTRT1	ENSG00000213339
DNM2	ENSG00000079805

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr19:10417492-10417504	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr19:10417496-10417508	AAACAAACAAAC	-	6.32
Nr2f6(var.2)	MA0728.1	chr19:10417593-10417608	GAGGTCAAGAGATCG	+	6
ONECUT1	MA0679.1	chr19:10417271-10417285	TTTATTGATTTTTA	-	6.23
ONECUT2	MA0756.1	chr19:10417271-10417285	TTTATTGATTTTTA	-	6.64
ONECUT3	MA0757.1	chr19:10417271-10417285	TTTATTGATTTTTA	-	7.12

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I010305

chr19

10415475

10416740

Enhancer Sequence

GTGGGGCAGA CAAGGTATTA GCACTGGGGG GGATCTGTAG CTTGTCCCCA ACAGCCCTCC 60
GAAATGAAGA TTTAGTATCA AGGTATCAGC CATCCCCCGA GGAGGCAACT AATATCTGAA 120
TGGCCTGGCT TTGCCTCTCA TTAGTAATAT TATTATTATT ATTATTATTA TTTTTGCAGA 180
TGGAGTCTCG CTCTGTTGCC CAGGCTGGAG TGTAGTGGTG TCATCTCAGC TCACTACAAC 240
CTCCACCTCC CGGGTTCAAG CAATTCTTGA GCCTCAGCCT CCCAAGCAGC TGGGACTACA 300
GGCGCGCGAC ACCACGCCCA GCTAATTTTT GTATTTTTAG TACAGACGGG GTTTCACCAT 360
GTTGGCCAGG CTGGTCTCGA ACTCCTGACC TCAAGTGATC CACCCACCTC GGCCTCCCAA 420
AGTGCAGGGA TTACAGGCAT GAGCTACCGT GCCCGACCTA ATTATTATTA TTATTATTTG 480
AAAAATAGTA AGCACAGGGA CAGCCTGCCA GGTTCCAATC CCAGTTCTCC ATGTCCTTGC 540
TGTGTGAGCC TGGACACATT ATCTCCTACT CTGTGCCTCA GTTTCCTCAT CTGTAAAATG 600
GGCTTCCCAA TACAACAGTT TTTTTTTCTT TGAAAATTTG ATTTATTGAT TTTTAAAAAG 660
AGATGGGAGT CTGGGCAATA TAGGGAGACC CCGTCTCTAC AAACAAAAAA AATAGCCAGG 720
AGTGGTGGTA CAGGCCTGCA CTCCCAGCTA GTTGGGAGGC TGAGGAGGGA GGATGGCTTG 780
GGCCTGGGAG GTCCAGGCTG CAGTGAGCCA TGATTGCGCC ACTGCACTCC ACCCTGGGTG 840
ACAGAGCAAG ACCCTGTCTC AAAAACAAAC AAACAAACAA AAGCAAAAAA AAGCAGCCAG 900
GCATGGTGGC GGCTCACTCC TGTAATCCCA ACACTTTGGG AGGGCAAGGC AGATGGATCA 960
CCTGAGGTCA AGAGATCGAG ACCATCCCGG CCAACATGGC AAAACCCCAT CTCTACTAAA 1020
AATACAAAAA TTAGCCAGGC GTGGTAGCAG GCACCTGTAA TCCCAGCTAC TCCAGAGGCT 1080
GAGGCAGGAG AATCGTTTGA ATCCGGGAGG CAGAGGTTGC AGTGAGCCGA GATTGTGTCA 1140
TTGCACTCCA GCCTGAACGA CAGAGTGCAA CTCCATCTCA AAAAAAAAAA AAAATATTGT 1200
TTTGGCGGCA TGATTAAAAA AGTCATAATT ATAATTTTTA TAATAACAAT AAATAGGTAA 1260
AAATTAGAGC TGGGGGTCAT ACTATGTTGC CCAGGCTGGT CTTGAACTCC TGGGCTCATG 1320
CAATCCTCCC ACCTTGGCCT CCCAAAGTGC TGGGATTACA GGTGTGAGCC ACCAGGCCCA 1380
GCTTCCCAAA GCTTTTTTTT TTTTTTTTTT AAGGGGATGG AGTCTTGCTC TGTCACCCAG 1440
GCTGGAGTGC AGTGGTGCCA TCTCTGCTCA GTGCAACCTC CACCTCCTGG GTTCAAGCGA 1500
TTCTCCTGCC TCAGCCTCCC AAGTAGCTGG GATTACAGGT GCCCATTACC ATTCCCAGCT 1560
AGTTTTTTTT TTTTTTTTGA GACTGAGTCC CACTCTGTGG CTCAGGCTGG AGTGAGGTGG 1620
CGCTATCTCT GCTTACTGAA GACTTCACCT CCTGAGTTCA AGCGATTCTC CTGCCTCAGC 1680
CTCCTGAGCA GCTGGGATTA CAGGCACCCA CTACAACGCC CAGCTAATTT TTTGTATTTT 1740
TAGTAGACAT GGGGTTTCAC TATGTTGGCC AGGCTGATCT CAAACTCCTG ACTTCAGGTG 1800
ATCTGCTCGC CTTGGCCTCC CAAAGTGATG GGATTATAGG CGTGAGCCAC TGTGCCCGGC 1860
CTCCCCAGGC TTTTGAATGA GCCCATACAC ATAAAATACT GCCTGTTAAC CTCTTATTGT 1920
TGTCACTACC AACAAATAGT AGCTGTTAGC ATTATTGGGA AAAATCACCG CAGCCGCAGC 1980
TGCAGCCTAA GCAAGGCCAG GCCTGATTCC TAAAGAGACC AGGTCTCACA TTGGGAGTGG 2040
GGAGCCACTG AGTCAGGAGC GGCAGGACTG TATCTGGCAC CAGCTCAAGT TGTCAACCAG 2100
AGACTGGGCC ACGTGTAACG TAGAGCACAG GTGAGGGTCC ACACCGACGC CAGAGAGCAC 2160
CCCTACCTCC CACACTGGTG TTTGCGTTGT AACTGGGAGA AAGGGCGGCC TGGCCCCAGC 2220
CGGCCCCTAC 2230