EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-18319

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr16:89335160-89337160

Target genes

Number: 22
Name	Ensembl ID

ACSF3	ENSG00000176715
CTD	ENSG00000261546
LINC00304	ENSG00000180422
RP11	ENSG00000205015
CDH15	ENSG00000129910
ZNF778	ENSG00000170100
AC137932.5	ENSG00000260279
AC137932.6	ENSG00000261253
RP1	ENSG00000261574
U6	ENSG00000252887
ANKRD11	ENSG00000167522
SPG7	ENSG00000197912
RPL13	ENSG00000167526
SNORD68	ENSG00000200084
CPNE7	ENSG00000178773
DPEP1	ENSG00000015413
C16orf55	ENSG00000167523
CHMP1A	ENSG00000131165
CDK10	ENSG00000185324
SPATA2L	ENSG00000158792
TCF25	ENSG00000141002
TUBB3	ENSG00000198211

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4

MA0039.3

chr16:89336422-89336433

GGAGGGTGTGG

6.32

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH16I089268

chr16

89334986

89337146

Enhancer Sequence

CGTGATACGG CCGTGAACCT ACCCTGGTAT GGGCCAGGCC CAGCTGTACC CGCTCCTGGC 60
ATCTAGTTAC TACACGTGGC GGTAGCGCCA GCTGTGCTAC ATGTCTGTCC CCATAACCGC 120
TGTCTATGCC ACCTCTACCC TGGCCTGGGG CTCACCCTGG CCCGGGGGCC CTGCCCTGCT 180
CTGGGTGGGC CTGGGACTCA CCTCCAGCAG CCACTGCAGC TTATTAGAAT CGAACAGCTT 240
TGCTTTTGTC ATTTTACAAT TACTTACGGC CAGTGATAGT TTCACTTGTA TTTCTAGTAG 300
AAACTATGCC ATTTAAAAGT GCACATAAGG GGACTGGACT GGGGTAGCAC ATATTTTGGA 360
AACTAATGGA GAAATGGAAG CGTGGCCAGG GAGTACTGGT ATGTCACAAG CAACCGTGTA 420
GAGAATCTTT TTTAGATACC GTCTCAAGGC TGGAGTGCAG TGGTGCAATC ATGACTCACT 480
GCAGCCTTGA CCTCTGGGGC TCAAGGGATC CTCCCTCCTC AACCTCCCGA GTAGCTGGGA 540
CTACAAGTGC TACCACGCCT AGCTGATTTT TGTAGAGATG GGGTTTTGCG ATGTTGGCGA 600
GCTGCAGTGT GATCATGTCT GTCTCTAAAT TTTTCTCAAC ATATATATAT GTATGAAATC 660
GTTTTCGAAG CTCAGGATGG ATTCACAATC CTCCTCAATG GGCCTCATAG CTTTTACTCG 720
GCAGCTCAGA CATCACCAGT GTAAATTGTT ACATGGAATC ATATAATACC CTTTGGATGT 780
TCCAAACTCC GGTGAGTCAC TGAATTACTG ATGGGCCTCT GAGTGAGTTT CCAGTTTTGT 840
TCCAGTGAAT ATTTTTATAC ATATCCCTAA GGTTTTTTTT TAAATTTTGT CCCCAGGCTG 900
GAGTGCAGTG GTGCAATCTT GGCTTACTGC AACCTCTGTC TCCCGGGTTC AAATGATTCT 960
CATGCCTCAG TCTCCCGGAA TTACAGGCAC GCACCACCAT GCCCAGCTAA TTTTTGTATT 1020
TTTACTAGAG ACGAGGTTTC ACCATGTTGG CCAGGCTGGT CTCGAACTCC TGACCTCAGG 1080
TGAACCACCC ACCTCAGCCT CCCGAAGTGC TGGGATTACA GGTGTGAGCA ACCGCACCCC 1140
GCCCAAAGTC CCATTTTAAT GTAGTCAAAC ATTTATCTTC TTACAGGAAA GTCTTCCATG 1200
TGTCTTTATG AAGCTTTCAG TTTTTTCTCA CGGCTCTGGT TAGGAAGGGC CTAGTGGCCT 1260
GGGGAGGGTG TGGTGTGAGT GACTTCCTGC ACCATCATCT TAGGGCTGGC CAGAAATGCA 1320
CACTCAGCTA CGCCTCAGAC CTGAGTTCCT CAGCACAAGC CCCCAGGGGC CACGCTCCCC 1380
AAATACCCAC AGCTCCCACC GGGTAGGGCT GGTGGTTCTC ATCTGTGCCC ACATCAGCAC 1440
CTTTCTGAGA GCTGCAGTAT GACACACGGG TGCTTGGTTC AGGGACCTGG GTGGTGCTGA 1500
GCCTGATACT GCAGGTAGCC GGGGCCGCCT GCTCCCAGGC CTGGCTGGTG ACTGTACAGG 1560
GTGACGCTGA CTGTAAAGTT CTGTAACTTT TGGCAAGTTT CCGCCTTCCG TTGCCTCCTG 1620
GTGGATCCTC CAGGGTGTCC CGGTGAGCAG CCCTCGCGAC CGGGATAAGG GTGTGCTGCC 1680
CTTCCCGGCA CCTCCCCCGC CCCTGCCCAC CGCCCTGGCC AGCACTTCCA GAGCAGTGGA 1740
GGGTGAATGC TGGGACCTTA GAGGGGGCTC ACAGGGCAGT CCCAGGAGTT CTGACCATCA 1800
AGCCTAGGGT CCTGTTGAGC TGGCGACAGG AGCCGCTCCC TGCACACCGG GACAGAAGGG 1860
AAGACTGAGG AGGCCACACG CAGGGACAGG ACCTCACCTC CCCGAAAGCA TCGGCCAGAT 1920
TAAGAGAATC TGAAATTGTC ACCGCCCATC ACAGAACTGG GCAGCGGCCT CCCCCCAGGC 1980
AGCGCAAAGG GGGTTGTCAC 2000