EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-04194

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr1:235403770-235405360

Target genes

Number: 7
Name	Ensembl ID

RBM34	ENSG00000188739
RPL23AP23	ENSG00000236863
AL391994.1	ENSG00000234086
GGPS1	ENSG00000152904
ARID4B	ENSG00000054267
RP11	ENSG00000230026
TBCE	ENSG00000116957

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXP2	MA0593.1	chr1:235404817-235404828	ATGTAAACAAA	+	6.14
NEUROG2	MA0669.1	chr1:235404569-235404579	AACATATGTC	+	6.02
SPIC	MA0687.1	chr1:235404403-235404417	AGAAAAAGGAAGTA	+	6.2

Enhancer Sequence

GGAGAGAAAA AAATAAAATA TTTCCATTTA TCCTCACAAA GAATAAGCAT GCCAATGATG 60
AATATAGGTA TTCCCAAACT CTTATTACAT TTCCTAAGAC CTGTAAAATG GCTAATTTAA 120
ATCTTAAATC ATTTTCTAAA TTTCTAAAAA ATAACAGCAA GAGTTTATCA TGAGAGGAAA 180
GCACATCATT TTCCCAAAAA TATTTCTGGT TTATTTAGTG CTACTGTAAA AAATTGAGGA 240
GGAAGATCAG GACAAATAAC TGGTTCCCAA ATCCTCAAAA AGGTGAAGGC CCCATATTAA 300
ACATCCCAGT ATTACACTAA AATATACACA ATCCCAATCT CAAATTAAAG GAATTCTGGA 360
GACAGTAATT CTATATCTCC AGTACAAAGT TAATTTTAAA AGGTAGGAGA GCAGACCTTT 420
ATTAACTGAG GTTAGGTTGG GAAGAGGAGG CAATCTGAAA AGAGATCACC ACTGCTATCC 480
ATAACAACAA ATACACACCA ATTAGGTATT CATAAAATGT CCAATAAGCC TCTTTTGTAT 540
GATGCTAAAA ACTTTCAAAA TTAAAAGAAA AACAGAAAAT CCTTTCAGTA ACATTAAATA 600
TTGGACTAGT AAATTAGAAA GATAACTGTC AGAAGAAAAA GGAAGTATCT GAAACCATCA 660
ACTTGATGTT TGAGGAAAGT GTAGTAAAAA GGAAAACAAA ACAAAAAGCT ATTCCAATTT 720
GAATCTGATT CTAATAAAGA ATCAGCACCA AAGAAAATGC CCAGAATGAG TAAAGACTAG 780
GAAATGTTTG ATGGACAACA ACATATGTCC TTTTTAGAAT GGCTATTATT GAATACCTAC 840
AAAGATAAAA GTGTTTTTCA GATAGTTTGC AATGATCAGT TTCACTGCCC AAAAAAGGAA 900
AACTGACAGA TTAAACTACT AAAAAACTTT AAACATGATT TACCTATTTA GTATACTATC 960
TAGTATACTC TGAAGTTGTC TTTGATGCCT TTCCAAAAGT ATGACAAAGT AACCGTCATG 1020
CCTTTATATT TATATATTCC AATATAAATG TAAACAAAGT GAAAACTATT TTTTTCTTTT 1080
TTGAGGCGGA GTCTAGCTCT GTTGCCGGGC TGGAGTGCAG TGGCACCACC TTGGCTCACT 1140
GCAAGCTCCG CCTCCTGGGT TCAAGCAATT CTCCTGCCTC AGCCTCCTGA GTAGCTGGGA 1200
TTACAGGTGC CTGCCACCAC GCCCAGCTAA TTTTTGTATT TTTGGTAGAG AAGGGGTTTC 1260
ACCATGTTAG CCAGGATAGT CTCGATCTCC TGACCTCGTG ATCCGCCCAC CTCGCCTCCC 1320
AAAGTGCTGG GATTATAGGC GTGAGCCACC CCACCTGGCC AAAAAAGTAA AAACTATTAT 1380
AATAATATTA AGCTTTTTAA AGTGACATGG GGAATACCAC CCCCTTGATT TCAATGATCA 1440
GTCAAATAAC TTAAAAATTG TTCCCTGGCA GAAACAAAGC AAATCTTCAA AGCTTGCTAT 1500
TGAATAGAAG TACTGTACTT TGGCTGGAAG TATTGTACTC CCAGCACTTT GGGAGGCGAA 1560
GGCAGGTGGA TCACCTGAGG TCAGGAGTTC 1590