EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-02507

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr1:156397960-156398870

Target genes

Number: 26
Name	Ensembl ID

RIT1	ENSG00000143622
KIAA0907	ENSG00000132680
ARHGEF2	ENSG00000116584
SSR2	ENSG00000163479
UBQLN4	ENSG00000160803
LAMTOR2	ENSG00000116586
AL355388.1	ENSG00000222611
MEX3A	ENSG00000254726
LMNA	ENSG00000160789
C1orf182	ENSG00000163467
CCT3	ENSG00000163468
C1orf61	ENSG00000125462
RP11	ENSG00000236947
Y	ENSG00000206651
IQGAP3	ENSG00000183856
APOA1BP	ENSG00000163382
GPATCH4	ENSG00000160818
BCAN	ENSG00000132692
NES	ENSG00000132688
CRABP2	ENSG00000143320
RRNAD1	ENSG00000143303
ISG20L2	ENSG00000143319
MRPL24	ENSG00000143314
PRCC	ENSG00000143294
HDGF	ENSG00000143321
SH2D2A	ENSG00000027869

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_03243	chr1:156397602-156399189	Brain_Angular_Gyrus
SE_04947	chr1:156395386-156400206	Brain_Cingulate_Gyrus
SE_05942	chr1:156397118-156400161	Brain_Hippocampus_Middle
SE_06772	chr1:156395625-156400424	Brain_Hippocampus_Middle_150
SE_07870	chr1:156374575-156400642	Brain_Inferior_Temporal_Lobe
SE_08876	chr1:156397775-156398195	Brain_Mid_Frontal_Lobe
SE_08876	chr1:156398358-156398491	Brain_Mid_Frontal_Lobe

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I156427

chr1

156397603

156399189

Enhancer Sequence

CTGCCCTGCC ACCCCCCGAC AAAGCATACA CAATGCCTAG GGGAGCATGT TGATGAAGAA 60
CACAGCCCAG CAGGCATGGA ACATGTGTGT GCACGTATGA TGGCTGGCAG CCTTAGCCTC 120
GCCCAGCAAT CTGGCCTCTG GGGTTCCGGG AATAGTCTGC TCCGCTCCAG CCTCCACTAC 180
CCCACAATGG CCCCAATCTT GTCTCCCAGA AAGCACAGTG TGGGTGGGGG ACTAGGGGCA 240
GGAAAAGTGC TGTCTTTATA TATCTCCTGG CCTTCCGTAG GAAAACACAC ACACACACAC 300
ACACACACAC ACAAACACAC ACACACACAC ACACAAACCC TCCATTAGAT GGGTGTGAAG 360
AGGGCTGGGG TAGGGTTCTC TCCCCTTCGA GAACCTAAGC ATTTTCCCTG ACACCTCACT 420
TGCCTTTAGG TTCCACTCAG CCCCTTTCCC ACCTGCCAGC TCATAGGAAA GGGGGGAAAG 480
GGGAATTAAA TTAATCTAAA TCCTATAAAA TGTTTTTGGA TTTTTCCCAA TTTTGGTCTC 540
CACCTTTCTT TCATCTGGGG ACATCTGGCT CCTTTCCCCC CATGCCCAAG TCCCTCAGAC 600
TTTGTCCTCC CCTAAAAGCT GAAGTCTCTA GGTCAGAAAG GAATAAGAGC CAGATGGAGG 660
AAACAAGGTC AGGAGTCCAA ATACAGAACC ATTTTTTCCC TTCCTTCCCA TCTCCACTAC 720
AGTTTCCTTC CTGCCTCTCC TCTGGTGCAA GCATTAAGAT GTTGGCCATG TCTGGTGGAG 780
AGAAGGGAGG GGCAGATTAA TAGGATCAGT AGCACCGTGA CCCTAAAGCC CCCCCACAAT 840
CCCATTGACA AACTTAGTGA GCTGTCTCCA GCCTGCATGG GCTGGGGGAA GGAGGGGAAC 900
CAGGAGACAC 910