Tag | Content |
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EnhancerAtlas ID | HS003-01159 |
Organism | Homo sapiens |
Tissue/cell | A549 |
Coordinate | chr1:43813670-43814510 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CDX2 | MA0465.1 | chr1:43813971-43813982 | TTTTATTGCTT | - | 6.32 | mix-a | MA0621.1 | chr1:43813904-43813915 | ACTAATTAATT | - | 6.62 |
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| Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
SE_03360 | chr1:43813758-43814605 | Brain_Angular_Gyrus | SE_23264 | chr1:43813602-43815872 | Colon_Crypt_1 | SE_23848 | chr1:43813941-43815771 | Colon_Crypt_2 | SE_24762 | chr1:43813843-43816295 | Colon_Crypt_3 | SE_31866 | chr1:43813587-43816440 | Gastric | SE_34471 | chr1:43813503-43816544 | HCT-116 | SE_35010 | chr1:43813554-43816263 | HeLa | SE_57439 | chr1:43813955-43815756 | VACO_503 | SE_65856 | chr1:43813657-43816001 | Pancreatic_islets |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I043347 | chr1 | 43813613 | 43816407 |
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Enhancer Sequence | GTACCCAAGC CTAGAAGCAC CCTTGACTCT TCTTGCTCTT CCCTTATCCC TTCCCCTTAC 60 TCATCAACTA AGTTGATGGC AATAACGTAC TAATAGTCCT CAAATTCCTA CCAGGATTGC 120 CTTAGACTCA TCTGTGACCA TCCAGCCGTG TCATCCATGC TTTTAGCACA CTAAACTACT 180 CTGTGGCACA AAACCAAGCA TTAAATGCTT CTCTGGACTT CCGTGGTGCC TTGCACTAAT 240 TAATTGTTGT GATTATTTAC CTGTTTGGAT GTCTTTCTCA TTAGATATGT AAGAGACGGT 300 GTTTTATTGC TTTCTCCCCA GTGCCTAACC CAATGTTTGG AGTATCACAC AGTTCATAAA 360 TGTTTGCTGC CTTCCTGCTT GTACACATGA TGCTTGTACC CCAGCGCCTA ACGCAAATCT 420 GGCATCCTCT GCAGCATGAG TATTATTTGT GGCATGGTCT GTGTGGCTCT GAATATATCT 480 GTTTCTGGGG GTGTCCATCG CCCGACCTGG AGTTGTGAGA ACACCCGGTA GGGTGTGCGT 540 GTACCGGGAT CCCTGCCGAG GGTGTACCTG GGTGTTGGTG TTAGGATACG TAGCTCTCTG 600 AGGTGAGGTC TGTGTCTCAG GAGGTGGGCC TGGCACGTTT CTCTCGGGCA GAGCGTGATC 660 CCGTTAGGGA GAGGCTCTCG GTTAGGGCGC TCTATCCTGT TGCTGGGAAG CGTGTTTTCT 720 GCCGGTGGGG CTCTTTGTGG GAATCTCCGA CCGCCTGGGG ATTCGGAGCT GCAGGATTTG 780 GGTCAAACAG ACGCTGGGCT ATCGAAGCCC CGACGCCGGG CCACCGCACG CTTCTTTGCT 840
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