EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-00692

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr1:25239360-25241050

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EBF1

MA0154.3

chr1:25240232-25240246

TGTCCCCAGGGAAT

6.01

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_11909	chr1:25236687-25243840	CD3
SE_15299	chr1:25236633-25239942	CD4_Memory_Primary_7pool
SE_16311	chr1:25235192-25240438	CD4_Naive_Primary_8pool
SE_16311	chr1:25240834-25243265	CD4_Naive_Primary_8pool
SE_16948	chr1:25236686-25240208	CD4p_CD225int_CD127p_Tmem
SE_17868	chr1:25235585-25258091	CD4p_CD25-_CD45ROp_Memory
SE_18972	chr1:25235034-25240730	CD4p_CD25-_Il17-_PMAstim_Th
SE_19286	chr1:25236647-25257899	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20022	chr1:25234379-25257824	CD56
SE_20914	chr1:25235156-25240444	CD8_Memory_7pool
SE_21650	chr1:25235897-25240853	CD8_Naive_7pool
SE_22025	chr1:25235090-25240502	CD8_Naive_8pool
SE_22463	chr1:25234579-25256550	CD8_primiary
SE_62407	chr1:25236597-25293990	Tonsil

Enhancer Sequence

CAATAGATGT TAGGGCCCCG TCCAGCCCCA GGCCCAGAGC TGCTATCTGC AGGCCCAGGA 60
GGATAGGACT TGGGAGAGGA AGATGAGAAG GTCTCAGTGG ACTCCACCAG GGGCCCTTCC 120
CTGCTCTGAA GCTCAGGGTT GAGAGTGCAA TTTCCAATCA TACCCTGCTC TAGACCACCA 180
AGTCACTCTC TGCCTCTGGG CCACAGTTTC CACATCTGTA AAGTGGTTAT CATACTGTCT 240
AACCCCTGAG GGTGCCGATG AGCTGGAGGA CAGGCCACAT GCTTTTAAAA GCAGAGGACT 300
GAGATGGCTG GGGAAAGCCC CGCGTTGGCC CTCAGGGCCT GTCCTGGCTG CTGTCAGCCT 360
CCAGCTGCTG GGCTCAGATC AGACAGCTCC TCCAGCATGG CCTGGATTAG TGTCTATGAC 420
CCTCACTTAT GGGAGGGCAG ATCCCAGCCT GCCCCTCCCA AGGGCCCAGT GGCCCCAAGC 480
TCATACCAGG CAGCTCTCAC CCACCAGTGG TCACTGTCTT GGGCAAGCCA CTCTTGCCTT 540
CTGGGCCTCA GCTGTCTTAT CTGCAAAATG GGGATCACAC CTCTAACCCC CGAGGGTCAG 600
GAAAGGTTTC AAGAATTACA CAGCCCACCA GGCCTTGGCC TTTGAGGAAG GTGTTCTGGG 660
TTCCCATTCT GACTTGGCCA TCTGCTCCTA GGCAAACAGC TCCTCTCTGA TGCGTCTGTG 720
CAGTGGGGGT GACCCACCTC ACAGGCATAT GATAAAGGCC AAAGTGGGAG CAGGAATGCT 780
GGGCCCCAGC CAGTCTGGGG ACTCACCAGG GTCACGCAGT GTGGGAGCTA GAGGACCAGG 840
GCTGGATTCT GGGTTGGCAG CTCCTTTACC ACTGTCCCCA GGGAATCCTT CCCCACCACC 900
AGCCTGGCCA GCCTGGGGTC CTACCCCCGC CAGGTACCTG ATGCTTCTGG GGGAACCAAG 960
AGACCATCAG GGTTACCCCC TTGCCTCCAT GCAGGCCCAA CACAAGCCCC TGTCATAGGA 1020
GTGGCAACCA TTTTAGCAGG CATCCATGAT GTGCCGGGCA CTGTGCAAGG GGGGCCATGC 1080
ATGTCGTCTC CAAGGGTCAT ATCCCTCTGA CAGGCTGTGA CTATCACCCC CGTTTTACAG 1140
ATGGAAAAGT GGAGGCACAC GGTCAAGGTC ACACGGTGTG TGGCACCCCT GAGATTCAAA 1200
CCTGGAAAGG TCACACATGG AGCTCAGCTG CTAAGGTCAT CGCTTCCCAA GACCTCCATG 1260
AGAGAAGAGC TGGGTCACCT GGCCGTAAGG TCCAGCTGGC AAGAGGCCAG CTCAGTGTTC 1320
AGCCTCTTGG GAAAAGCAGA GTCGGGCAGG GCCACAGGAA CAGCATCGTC TGCTGGGGAC 1380
AGTGTGGGCT CCAATGACCA GGCCCGTCAC CCATCTGAAG CCACTCGGCA GCCTTCTTGG 1440
CCGCCTGGTG CGGCTGTGAC CCAGACACAG CAGCCACTGT CTACCCAGCA GCAGGGTGGG 1500
GCGCCGGGCC CGAGGCCGGC TCTGCGGCCT GTCAGGAGAT TTACACCCGA CTCTTAACAG 1560
CCTCGCGGAA TCGCAGGCGG GTGCCGGGCC TGGGGTGGTC TGCTGTGAAT CGGCCCCCTG 1620
TGAGCAGATG AAAGCCGGGT CGGTGGCTGG GCAGGGAAAC GGGCTGGCCG GGGGCCAGCG 1680
GGCAGGGAGG 1690