EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS003-00276

Organism

Homo sapiens

Tissue/cell

A549

Coordinate

chr1:10730960-10732080

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFYA

MA0060.3

chr1:10731629-10731640

TCTGATTGGTC

6.14

dbSUPER

Number of super-enhancer constituents: 13
ID	Coordinate	Tissue/cell

SE_23439	chr1:10731642-10732247	Colon_Crypt_1
SE_24212	chr1:10731772-10732264	Colon_Crypt_2
SE_25175	chr1:10731161-10732393	Colon_Crypt_3
SE_26713	chr1:10723067-10732640	Esophagus
SE_28494	chr1:10731231-10732570	Fetal_Intestine
SE_31374	chr1:10720955-10732698	Gastric
SE_33519	chr1:10730303-10733302	H2171
SE_40607	chr1:10721949-10732295	Left_Ventricle
SE_41555	chr1:10729530-10731129	LNCaP
SE_41555	chr1:10731189-10732255	LNCaP
SE_42099	chr1:10722142-10732471	Lung
SE_54510	chr1:10711383-10754578	Stomach_Smooth_Muscle
SE_65281	chr1:10730535-10740589	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I010662

chr1

10722544

10750567

Enhancer Sequence

TCTATCCCCA GCTCCAAACA GAAGGGCCTC TAAGTTCTGT GGGAGGAATG GTTGCTGCTC 60
CCTAGGGGTT CAGCCAGGGC CCGAGGGGTT CAGCCGGGTC CCCTGGCCCT CAACAGCTCC 120
AACTTGGGTG GGGGGCATGC TTGGCCACTG GGCCCTAGCT TGCCCCACTT TGTTTATTTA 180
TTTATTATGA TTTTTTTAGT CCAGTTAAAA GGTTCGCTAT CCAGACGCGT CTAAGTGGCC 240
TCACTTAGCG TAAGTAACTC TATAAATCAG GGGAACTGTT AGCATCCACC GCACAGGCTG 300
GCTATCAATC TCCCCCAGGT CACAGCCAAA CAGGAAGGGG AGAAAAAAGA GAGTTACCAC 360
CCAGGGGAGA TTTAAAACAC ACACACTGAG CAAACGCGCA CAGACCGCGT GCATGCCTGT 420
GCGCGCGCAC ACACGCTCGG ATGCCTGTGT TTGTACAATC CCGTTATATT CACATGTGCA 480
CATGTGGAAT CTCAGAGTGC TGCGTGTGGT CGTGGTAACA GAACACAAAC ATGGCTCCTG 540
CAGCCATGAG GGGAGACAGA TGTGAGGGAA GGGGCTTCGG GTGAGCCTAG GACCCCCAGG 600
GCTGGGCTGA CTCTCAGTGC CTGAGCTGCC CTGCTCCCGG CAAGTGTCTC TGGAGGGCAG 660
TGGAAGGGGT CTGATTGGTC CCCTCCCCTC TCTGTGGCCC CCACCTCTGC CAAACCCAAA 720
GGGCCCAAGC TTTTCCCTTT CCCAGCCCCA GGTGGGCACT TGGCAGGGGG GTGGAGCCTG 780
GAAAAGGAGG CAGGAGGCTG TAAGCTGTGG GCCACCGCAG CGGAGCATGA TGTCACCTCG 840
GGTCCTTACT CGCTATGCCC GAGGCTGGCA CACCCCAGAT GCGGCACTGG GCTCAGGAAA 900
GGCAGCATCA TCTAAATGGG TGGCCAAATG CCATGCAGTG CACTGGAGGG TGCGAGGCTA 960
GGATGATGGC AGAAACACCC TGCCTTTTCA CGGGAGCAGG TGTGGCTGGC TGGGTGTCCA 1020
CACAGCCTGG ACTGCCCTGG AGAGGCCCCA GACCTAGACA GCCCCACAAG CTGTGCCATG 1080
CCAGAGACCG GAGTGGGAGA GGCGGCTCCT GGCATCTGCT 1120