Tag | Content |
---|
EnhancerAtlas ID | HS002-09191 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr7:139343120-139344700 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr7:139343256-139343277 | AGTAGGAAAGCGAAAGCAAAA | - | 6.58 | IRF2 | MA0051.1 | chr7:139343260-139343278 | GGAAAGCGAAAGCAAAAT | + | 8.85 |
|
| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_03299 | chr7:139343164-139344567 | Brain_Angular_Gyrus | SE_04081 | chr7:139343016-139347437 | Brain_Anterior_Caudate | SE_04859 | chr7:139325767-139351765 | Brain_Cingulate_Gyrus | SE_05968 | chr7:139325681-139349527 | Brain_Hippocampus_Middle | SE_06816 | chr7:139326741-139356750 | Brain_Hippocampus_Middle_150 | SE_07947 | chr7:139326736-139349104 | Brain_Inferior_Temporal_Lobe | SE_32129 | chr7:139343271-139346453 | Gastric | SE_36481 | chr7:139342935-139346491 | HMEC | SE_37689 | chr7:139344200-139346834 | HSMMtube | SE_41067 | chr7:139343161-139346337 | Left_Ventricle | SE_42888 | chr7:139343305-139344347 | Lung | SE_48954 | chr7:139343235-139344612 | Right_Atrium | SE_56055 | chr7:139342961-139345351 | u87 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH07I139658 | chr7 | 139343355 | 139346404 |
|
Enhancer Sequence | ATGTTTAATT AACTCATTCA CTCACTCAAA TCATTCAATG TATGTATGCT ACACAAATGG 60 CCATGTTATG AAATGAAGAT GAGCCAAGAG TTTTCAATTC CACTGAATTA TTTTCAGGGA 120 AAGTGACTTC ATGAGAAGTA GGAAAGCGAA AGCAAAATTT TCTCCATAGA AACTAATTTA 180 ATGCCCACAC TAGTTTAACC TATTTTATAA ACCAAATACC AGAAATTTGG ACAGAGAAGA 240 GTCTTTGACA ATATACAACC TAGGTAGGAA GAGGAGACAG TCAGAGTTCT GGTAGGTACG 300 GCAGAGTTGG GAGGTGCTGT GAAGGTGGGG ATAAGATCTT GTTTTGTACA TCCTAATTCT 360 GAGTGCCCTT TTATTACAAC TGCTTTCTGC CATCTCCTTC AGGCAAAACC CCAGGTTGCT 420 GAAGTGCCTG CTAATTTTAT ATTGGAAGGC CAGTTCTGGG TCACTGCACT ACTAGTCTTT 480 CTCAACCAGG GTTTTCTATC TGAACTACAG AGCACAGAAA ATGATCTGTG TGACTGTAAC 540 CTTCCTATAT ACCACTCTCA GTGGCCAGGA GAGGAGTCGA TTCACTACAA TGGATGTCTT 600 AAAGCAGGAG GGCTTATTTC TCCCTGGGAA CCCTAGTTGG GGAAGGCTAA ACACTGACTG 660 ATGGACATAT TTCTCGCTGA GGCCGACGGC ATGTGGTATT GGCATTGGCT GACCAAAAAC 720 AATAGGGCCC TGTCTCTGCT GCAAGGGGGC CGGGAGGGAT TTTTTCACTG AGGAGCACTA 780 CCTTAATGAA CTCACTTGCT TTTCTATGCC GCTTGTGTCC ACATTTCCCT CACTGCCCTA 840 CTTCTTTCCT GGGACTGTCT CTCGTCTTAA CCCTTTCCCT GCCACGCATC ACAATTAGGC 900 CATTCAAACC AAATTTTCTA CTCTAAAAGC ATTCACAGAT ATGCCATTTC ATGCAGCTGA 960 AGATTCAACA GGCATAATTT AATAACATCC GATTCTTTCT GCACCCTTCA AGTAGGAGCA 1020 GCCTTTTTTG AGTCCATCTT TTTGGTAGGT TCCCTGGCCC TGAGCCGCGG GGTCAGATCT 1080 CCAGCCAGAA GACCCAGCAC AGACCCCCGG CTGCAGCTGC AGCTTGTGCA CGGATAGAGA 1140 GAGATTCCTG CTTGGGCTAT TAGTGTCCCA GGTCTGGACT CTGGTTAATA TGGTCGTCAC 1200 TGTCACCTCT GCTGTTGCTA TCCTATAGTC TCTGCAGTAG GCATTCAGTT TTCTCTTTAT 1260 TCCCTGTCCT TGGCCTATGC CTTGGCCTAT GCCTATGCCC TTTAAAGGAA GACAGACCCT 1320 TCCTTTAAAG GGTGTGTCTC CAGCCCACGA ACTTCTGGCT GGCTAGAGCT GCATTCTCTC 1380 TCTTTTCTGC TCTTTTCTTC CTGACACCCT ATTAGAAAAT TAGGGTTATT TCTTGATTTC 1440 CTTTATTCAG TTCTCCCTGA TCCCTCTACA TATGCCACCA TCATACAGGC ATATAGCTAA 1500 TCTTTACTTG GGTTTAGTCT CTTCAAAAAC AGACCTATTT ATAGCTTCCC AATATATAAC 1560 TGCATGTTAA ATGCAACACC 1580
|