| Tag | Content |
|---|
EnhancerAtlas ID | HS002-07006 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr3:127453010-127455060 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| SOX10 | MA0442.2 | chr3:127455047-127455058 | AAAACAAAGAA | + | 6.62 | | Sox3 | MA0514.1 | chr3:127453959-127453969 | CCTTTGTTTT | + | 6.02 |
|
| | Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
| SE_00025 | chr3:127446474-127470765 | Adipose_Nuclei | | SE_03776 | chr3:127454036-127454640 | Brain_Angular_Gyrus | | SE_07382 | chr3:127452833-127455241 | Brain_Hippocampus_Middle_150 | | SE_07763 | chr3:127452996-127455456 | Brain_Inferior_Temporal_Lobe | | SE_23130 | chr3:127453453-127454071 | Colon_Crypt_1 | | SE_29692 | chr3:127453038-127455323 | Fetal_Muscle | | SE_31809 | chr3:127452697-127454037 | Gastric | | SE_32550 | chr3:127452284-127456462 | GM12878 | | SE_33427 | chr3:127453355-127455819 | H2171 | | SE_37481 | chr3:127453041-127455696 | HSMMtube | | SE_40646 | chr3:127452285-127460891 | Left_Ventricle | | SE_42255 | chr3:127452900-127454284 | Lung | | SE_42255 | chr3:127454369-127455087 | Lung | | SE_48433 | chr3:127453171-127454222 | Psoas_Muscle | | SE_48608 | chr3:127452556-127454257 | Right_Atrium | | SE_50388 | chr3:127452849-127456528 | Sigmoid_Colon | | SE_51198 | chr3:127452852-127460861 | Skeletal_Muscle | | SE_52979 | chr3:127452947-127454247 | Small_Intestine | | SE_52979 | chr3:127454396-127455079 | Small_Intestine | | SE_53526 | chr3:127452987-127454386 | Spleen | | SE_53526 | chr3:127454401-127455787 | Spleen | | SE_54601 | chr3:127453130-127454672 | Stomach_Smooth_Muscle | | SE_55690 | chr3:127452267-127460872 | u87 | | SE_58865 | chr3:127447411-127515741 | Ly3 | | SE_67490 | chr3:127452267-127460872 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH03I127733 | chr3 | 127452500 | 127456642 |
|
Enhancer Sequence | GAATCTACCT TGACCGGGTC TCACTTTCAT AACCAGAGGA AAGACGCAAC ATGTGTTACC 60
CAAAATGCAG GAAAGTGGAT CCAGGTGCTA ACCTGGGACT GGTCTGGTCC CTCATCAGCT 120
CAAAGAGGAA TGCCAGCGAG GCCGGCCTAG AGTAAGGAGG CGTTGCCATG AGGCGCCAGG 180
GCACCTGGCT CCCAGTATTC CATTTCACCA TGGAAGCATC GCCCACTGCC TCTCCCATCA 240
GGGGTCTGCA GTGCGCCCGT GCCTTCATTT ACCCTAACTC TGAGCCCACA CGCTCTCCAC 300
TGGGGGTTCG GCACAGACAG ACATTTCTCC TCATTTCTCA CCCCTGCTCC TTCGCAGGTG 360
CCAACCACAG AGTGTCTCCC TGACCCTCCA GAGTGGCTGC ACAGGGGCCC TGCAGGATTT 420
GCTAGCCTGC CAAAGAAACC AACTCCATTA AAAGATGAAA GAACACATTT GAAAAAGGGC 480
TCTTATCTTG GCTCTGTCCC AACTTGACAG CCCCCAGGTG AAGAGATCCA AGGACCAATC 540
CACCTTTCCA CAGGCAGTTT ATTCCCCTCA GCCCAGCAAA TGCCTTCTCT CTGGATTTTC 600
CTGGTCATCT CTCCTCAGGT GACTAAGCCA GCCAGTCATG GCAGGCACAC GGGCTGAGGC 660
TCTGGAGAGA TGGGAGCCCC TGACTGTGAG GAGGACAGAC ACTTCCTTCC CTTACAATTT 720
GGGTGTCTGC CCTGCATTCC TGGCCAACCC ACAGGAAGTC AGCCAGCATC AGAAAGGAGG 780
AATCTTACAG AATGTGTGGT CAGGGCAATA AGACAGACGA TCACTGTGGG GCCTCTAGCC 840
TCAAGAACCA CACAACAGAC CCGGAGGAGC CCGACGTGGG AGTCTTGGCT CATTCAGACC 900
CAAAGGAAGA ATTAAAGTCA TTTGTTGATG AACACCAGAG TGGAACAAGC CTTTGTTTTA 960
GGAGCAGAAA GGAAGAATTG CCTTAGTCCC CATTTTTAGA TCTAAAGGAA GTCATAAACT 1020
CATATATGCT ACAACAGGAG GGAGAGAAAC TAGTACAACC CCCTTGGGAA AACAATTTGG 1080
TATCCGGTAA GGTTGAATTT CCTTACTTTA CAACTCAGCA ATTCCACACC AGGATATATG 1140
TCCAAGAGAA GCTCTTAGAC ACAGGAATCG GACTGTTCAT AGCAGCCCCG TTGTTATAAC 1200
TAGAGAATGG ATACATTGTG GCAAATGGAT TATCACACAG TAGTGAAAAG CAAATAAACT 1260
AGAGCTGCAC AAAGCAGCAC TGATGAGTCT TAGAAAAGAA ACACAAAGTG AAGAAAGCAA 1320
ATCACAGAAG ACTGAGTAAG TATGACTCCA TTTTATAATG TTAAGAAAAC AAGCAAAAGC 1380
AAATATACAT ATTTTTAGAG ACTCATACTT ATGTGATAAA CACATAAAAT AAAAAAGCAA 1440
GAGAATGAAA CACAAATTCC AAGATTGTAG TTACCTCCAG TCACCTCCTG TCTACTCATC 1500
AAGTTGTTGG GGGAATAAAT GAAACAGCTG AACATACCTG GCAAAAGGTG GGTTTCCAGC 1560
ACGTGCTCGC TCCCCGCCTT CTCCCATTCC CTCCCTTTGT ATGGTTTCAG AGGAGAAAAA 1620
TGTATAAATT CTGGCATTCT CTTGGTGCTC GCATCCTTCC AGGGGAAGAT CCTTCTGAAT 1680
CTAGTCTGCA TCTCTCCCAC TTACAAGGAT TTTCTCCTGT TCAGCTCTGC AAAGAGATGG 1740
GGCAGCTGGT CTGCACCTTC AGTTAGAATC CTGGCTCTCT TAGAGTGCAA GCGTTAAACC 1800
ATCTTTCGGC TCAGTTCCTT CACGCTAAAA GCTCCCAGGT TTAACATGGA ACAGACCTTT 1860
TTATTTTCCC TTGAAAACAT TCAGTTAGAT CTGTTGTCCT CTGTGAGATT ACAGAAGTTC 1920
CCAAACAGTG CTAGTTCCAT TGTTTGGAGC TCAGGGTCAG TCAAACCTAA TAAAAGTACA 1980
GACACCTGGC AACCCAAGTT TCACTTCTGC TGAAATTATT GTTAAGTATC ACTTTAAAAA 2040
ACAAAGAAGA 2050
|
