| Tag | Content |
|---|
EnhancerAtlas ID | HS002-06273 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr20:62257380-62258300 |
Target genes | | Number: 14 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| GLIS2 | MA0736.1 | chr20:62258270-62258284 | CGCCGCGGGGGGGC | - | 6.15 | | SREBF1 | MA0595.1 | chr20:62257574-62257584 | GTGGGGTGAT | - | 6.02 | | ZIC1 | MA0696.1 | chr20:62258270-62258284 | CGCCGCGGGGGGGC | - | 6.13 | | ZIC3 | MA0697.1 | chr20:62258269-62258284 | TCGCCGCGGGGGGGC | - | 6.65 | | ZIC4 | MA0751.1 | chr20:62258269-62258284 | TCGCCGCGGGGGGGC | - | 6.47 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_16797 | chr20:62257352-62260395 | CD4_Naive_Primary_8pool | | SE_22102 | chr20:62257183-62260789 | CD8_Naive_8pool | | SE_34418 | chr20:62257074-62260720 | HCT-116 | | SE_43229 | chr20:62257113-62260548 | Lung | | SE_53598 | chr20:62257118-62260467 | Spleen | | SE_57660 | chr20:62257319-62259814 | VACO_503 | | SE_66845 | chr20:62257239-62257790 | Jurkat |
|
Enhancer Sequence | TCACGCATGA ATTACACAGT AACCAAATAG ATAACATGCC ATGACTGACG ACGGGCCCAC 60
AACAAATCAG CTCCGACCAA CAGGGTCCAC ACCACCATGG GTCTACACAG ATCCAGGTCC 120
CGCCTGTGAG CCTACAGTGA CGCGGGCCCC TGTGGGGTGG TCCCTGCAGG TCAGGTCCCT 180
GAGAGTGGGT CCCAGTGGGG TGATCCCTGC GGGTCGCGTC CCTGCGAGTT GGGTGCCTGC 240
CGGGTGGCCC CTGCGGGTCG GGTGCCTGCG GGGTGGTCCC TATGGGTCGC GTCCCTGCGG 300
GTCGGGTGCC TGCGGGGTGG CCCCTGGGAA TCGCGTCCCT GCGGGTCGGG TGCCTGCGGG 360
GTGGCCCCTG GGGATCGCGT CCCTGCGGGT CGGGTGCCTG CGGGGTGGCC CCTGGGGATC 420
GCGTCCCTGC GGGTCGGGTG CCTGCGGGGT GGTCCTTGTG GGTCGCGTCC CTGTGGGGTG 480
GTCCCTGTGG GTCGCGTCCC TGTGGGGTGG CCCCTGCGGG TCGCGTGGTG GCCCCTGCGG 540
GTCGGGTGCC TGCGGGGTGG TCCCTGTGGG TCGCGTCCCT GCGGGTCGGG TGCCTGCGGG 600
GTGGTCCCTG CGGGTCGCAC CCCTGCGGCG TGGTCCCCCC GGGATGGGTC CACCGAGGAG 660
GCCGCTGGAG GCCGAGCCCG CGCCCGCCCG CGGCGCCAAG ATGGAGGCAG GAAGCGCCGC 720
CGCCCGCGCC CGCCACCGCC CGCGCCGCCC GCCTGACGCC GCCGTTGCGC CTGACGCCGC 780
CGCCCGCGCG GCCGCCCCTC CCCCGGCCCT CCCCTCCCCC CGCCGTAACG TCCTGACGCT 840
CCGCAGGGAC CCCTGACTGG ACGGCGGCGC GTGAGCGGAG CGAGAGGCCT CGCCGCGGGG 900
GGGCCGCGGG CTCGCCGGCG 920
|
