| Tag | Content |
|---|
EnhancerAtlas ID | HS002-06192 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr20:52421560-52423140 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NEUROG1 | MA0623.2 | chr20:52422326-52422336 | GACATATGTC | + | 6.02 | | NEUROG1 | MA0623.2 | chr20:52422326-52422336 | GACATATGTC | - | 6.02 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_02652 | chr20:52421742-52422583 | Astrocytes | | SE_33779 | chr20:52421185-52424004 | HCC1954 | | SE_36429 | chr20:52421151-52423713 | HMEC | | SE_43381 | chr20:52421064-52424290 | MCF-7 | | SE_45892 | chr20:52421213-52423985 | Osteoblasts | | SE_47103 | chr20:52414579-52428224 | Panc1 | | SE_56621 | chr20:52421162-52423076 | u87 | | SE_64967 | chr20:52421394-52423126 | NHEK |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I053804 | chr20 | 52421158 | 52423926 |
|
Enhancer Sequence | AGGACCCCAC TGAGGAAACC AGGGATTCAT GCCTCTGACC TCCAGCTCAC CCCAGGATAC 60
ACACTCAGTG ATGAAATAAT CCTAACCCTA AATTGCATGA ATTACATTGT TCTCCCTCCC 120
TGTCCCTTTC CTCTGATCCA TCTCTTTTGC AAAACTCATG CAATCTGAGT GTGTTTCATG 180
GTAAAATTGT AATGTATACA GTTTTCCCAT TTGTGTTTTT ATTTGCAAAC TGACAGCCGC 240
TTAACCCTGG CACTCGTGGA AAATATTGCC TTGGAAAACG ACCTCACCTG ACTATGGCAT 300
CCATGAGGAG CAGTGAATGA TACTGATAGG GGTTAAGACT TGCTTGCCCC TCTGCTTTTG 360
CACAAGTGGT GCCTCTGCCT GGAATACCTT GACCTGCCTC CTGAGCTGTG TATCCAAATC 420
TCAGTTCTGG CATCCCTCCC TCTGTGATGC CATCCTGGGG ATCTCCAGCA GAGTCATCAT 480
GGCCTTCTTT GTCCCTGCCC CTTACATCTG CTGTGATACT TTTCCTGGAG GTCAAAACAC 540
AAATACGTAG AATGCTCAAT TTCCACAGAA GGCTAAGAAA TGAACCAAGT GGGTTGGGGG 600
TGAAGAACCG GGAACCAAGG CACCAGAGTG AACTGGGAAG CCTGTGCTGG GTCCAAGGGT 660
GCAGCTGCTG CTCAGGCCTG GCCTGGTTTC TATGAGGAAT GTGGGCTCAG GGTAGCCAGA 720
GCTCCTGATT TTTCAAGAGA ACTGGAAATC TGAACTTTCT TTTTTTGACA TATGTCTATC 780
TTTAAAGGCA GTTGTTCCAG ATTTTAAAAT GACTCCATTC AGAGTTGATA AATCACACAC 840
ATTCACAGAA TAAATCCACT CCACGGGCCA CCAGTGACAG CCCATGCTCT AGGCAAAACT 900
CTCCGGAGTC TGAGGCTCTG TCCTTTCTTT CTCAAATTCC CAGTGCCTGG GGCACGGAAC 960
CTGGCATGAA GAGGCACTTA GGAAATGTTT GTTGAGTGAA TAGATGAGGC AATGAATCAT 1020
CAGGATATTA AAATTCTTTC CACTCTGCAT GAGCCATACA TATAGTGTAA TTTGTATATT 1080
TATATATGCT TTCCTTCGGG CCCATGAACA AAGCCAGGTA CTTGCCAAAG TGCAAAAAAA 1140
GTTTGATATT TGTATAACAA TAATAAACCC AGGGCTGGGC GCAGTGGCTC ACACTTGTAA 1200
TCCCAGCACT TTGGGAGGCT GAGGCAGGCA GATTGCCTGA GCTCAGGAGT TCGAGACAAG 1260
TCTGGGCAAC ATAGTGAAAT CCTGTATCTA CAAAAATTAA AAAAAAATTA GCCAGGTGTG 1320
CATGCCTGTA GTCCCAGCTA CTTGGAAGGC TGAAGTGGGA GGATGGCTTG AGCCCAGAAG 1380
GTGAAGGTTG CAGTGAGCCG AGATTGCACC ACTGCACTCC AGCCTGGGTG AAAGAGTAAA 1440
ACCCTGTCTC GAAAATAAAT AAATAAATAA ATAACATTAA ATTAAATTAA ATTAAAATAG 1500
GACAGGCATG GTGGCTCACA CCTGTAATCC CAGCACTTTA GGAGGCCGAG GTAGGCAGAT 1560
AGCTTGAGCC CAGGAGTTCG 1580
|
