| Tag | Content |
|---|
EnhancerAtlas ID | HS002-06119 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr20:47343570-47345930 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr20:47345337-47345358 | TTGTGGTTTCACTTTATTTTC | + | 6.07 | | Nr2f6(var.2) | MA0728.1 | chr20:47345832-47345847 | TGAACTCCTGACCTC | - | 6.22 | | RREB1 | MA0073.1 | chr20:47344077-47344097 | CTCCCAACCACCAACCACCC | + | 6.89 |
|
| | Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
| SE_01671 | chr20:47343927-47345354 | Aorta | | SE_03141 | chr20:47336078-47345735 | Brain_Angular_Gyrus | | SE_03860 | chr20:47335137-47350514 | Brain_Anterior_Caudate | | SE_04767 | chr20:47330290-47357597 | Brain_Cingulate_Gyrus | | SE_05768 | chr20:47330773-47357344 | Brain_Hippocampus_Middle | | SE_06681 | chr20:47321409-47357433 | Brain_Hippocampus_Middle_150 | | SE_07719 | chr20:47329977-47357562 | Brain_Inferior_Temporal_Lobe | | SE_08847 | chr20:47344206-47345061 | Brain_Mid_Frontal_Lobe | | SE_08847 | chr20:47345299-47345667 | Brain_Mid_Frontal_Lobe | | SE_09151 | chr20:47344028-47345465 | CD14 | | SE_09151 | chr20:47345693-47347237 | CD14 | | SE_11697 | chr20:47343801-47347795 | CD20 | | SE_20065 | chr20:47344072-47345619 | CD56 | | SE_22493 | chr20:47344181-47345526 | CD8_primiary | | SE_33505 | chr20:47344134-47350438 | H2171 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I048728 | chr20 | 47344672 | 47345750 |
|
Enhancer Sequence | TTAAAGACAT GGCACATAAA ACTATGCGCT GTTTATGGAG AGCATGTATG AGGTCAAATA 60
TAAAGACATG CGTGTTAAAG GAATGCACCC AATTCCAGTG GGGGTTCCCT CTGTGGAGGG 120
AGAGTTTTGG GTTGGAAAGT GAACCAAGAA CCTTCAACTG TTACTGAAAA TGTCCTAGTT 180
CTTTAGCTGG GAGGAGTGTA CGTGATTCTG TCATATGCAT ACCTCTATTT TGGCTTGCAG 240
AGTTAAAAAG TACAGCTCTC TTAGGAATGG AATACCGTTA CCCTAACTCC CACGCTCAGC 300
CCTAAGCTCC TGTCCACATG AATCAACCCA GTGTTCTCCA TGTCAATACT TCCGCCCTGC 360
AGCCCCCTTG CCTCTCTCGG CTCATTCCAT GCCTCTTCTC TGGAATGTAT TCTCTTCCCC 420
AATAAAAATA ATAATAATAA TAATACTGCT ATCATCCATC GTAAACACTG ACCAAGAGCT 480
AATCATGTGT CCAGCAGGCC TCTAGGGCTC CCAACCACCA ACCACCCTAT CAACTGAAAA 540
CTATGATTAT TCTCATCTCA CAGCTTAGAT CCCTGGGGTG TGAGAGGTTT AGTCTTTTAC 600
TCCAAGACCA TCCCAGAAAA GTGAGTCACA GAGCTGGGAC CTAGAGCCAG GCGGGTTGAC 660
ACCGAGTCTG GGATTGAAAC CATGATGCCC ATGTGCCCTT ACCCCAAGCC CACCCATGCA 720
CCAAGGCCAT CCCTGCCACC CAACCTGCTC TCAATTCCCA GGACTTCTTC CTCCTAGAGC 780
CTTCATAGGT GGCCATTTGT TCCACGTGGC TCTCAATCAC ATTACAGGCA CTACCCTCTC 840
CTTCAGAGAG GCTCCAACTT AAGAATCCAT TTTTGTTTGG CAGGAACCAT GAGTTCTGCT 900
GTGTTTCCCT GCCATGCCCT TCACAGTCCT GGGTCCCTCA GGCTCACTAT GTGCCCATTA 960
TGTGTAAGTG AATGAACTAA CCAACTAACT AATGAAGGAA CCACCCACCA GCACATCCAG 1020
CCATTCCTCC TCAACACCAC CCTGGCAAAC TGGAAATGAA TCCAGACTCT TGGGAAAAGG 1080
GATTCCCATC CTATCATTTA TTCATTCATT CAACAAATAC ACATTGTGTG CTGTGTGCTG 1140
TGTGCTGTGC ACAGTTCCAA GCACTGGGGG GCTGCCCAAC AAAACAAATT CCCTGCTTAT 1200
ATTCAAGTGA AAATAAGACC ATAAGAACAC ATACCATGTG CCCACCATAT GCCACACGCT 1260
GTGCCTTGTG CTTCACATAC ACAGAAAGTT CATGCCGAAA GCCTAAGGAA ATAAGCATGG 1320
ACCACTGTCC CCTACCACAC ATGGGGAAAT CGTGGCACGA AGAGCTGGCC CAAGTCTCAG 1380
AGCTACTTCC ACTGCCTCTT AGGGATCACA ATAAGCTCTG CCTGGAAAAG CAGAATTCTG 1440
GGGACCCCAG GTCCCAGCTC TAGCTGAGCT GAATGGCCCC CACCAGTGTT TACCCCTGGC 1500
ACAGATGGGG GATTGAGGCT GCGGCAGCTG GGAGATGCCG GGCCCCACGC TGCTCACACT 1560
CAGGCCTTTG TCCTAGGAGC CAGCACTTGC CACAGGCTGC CCTGGTGATG TCAGCTCTGG 1620
GCAGAGTGCA GGGCGCCTGG GGGTGGGGAA GTGCTTTCTA GAAGCCCCCA GGGCTTGGCG 1680
TGAGAAGGGC CCATCTTTGT CCAGGATCAA GGAGTTTTCA CAAGATTTTC ACAGCCACCA 1740
AGGACACTTC CCCACAAACA CTCTAGATTG TGGTTTCACT TTATTTTCTT TTAAAAAAAA 1800
ACAAAAACAA AAAAAACAGG CAAACACACA CAGAGCTAGC ATTCACTATT CTCACTACAT 1860
TTCAGGCACT ATGGGAAGAA CTTCTGAGAA GTCCTTAAAT GCTCAAAATT CACAGAAGTG 1920
AGTTAGATGA GGCGTCAACC TCATGGTCTT CCCAACCTCC TAATGGCAGC ACGTTCCTGG 1980
ACTATCCTGA GTCCTCCCTT TCTGCCCATG CTGCCCCCCT GGCTGATCCC ACCCTGACTC 2040
GGCTTTTTTT TCTTTTTTTT CCTGGACAGA ATCTCATTCT GTCGCCCAGG CTGGAGTGCA 2100
GTGTGCAATC TCGGCTCACT GCAACCTCTG CCTCCTAGGT TCAAGTGATT CTCCTGCCTC 2160
AGTCTCCTGA GTAGCTGGGA TTACAGGTGC ACACCACCAT GCCCAGCTAA TTTTTGTATT 2220
TTTAGTAGAG ACAGGGTTTT GCCATGTCAT CTAGGCTGGT CTTGAACTCC TGACCTCAGG 2280
TGATCTGCCT GCCTCGGCCT CCTAAAGTGC TAGGATTACA GGTGTGAGCC ACCGTGCCTG 2340
GCCCTGACTT GGCTTTAAAC 2360
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