Tag | Content |
---|
EnhancerAtlas ID | HS002-06005 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr20:30262550-30263640 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF2 | MA0051.1 | chr20:30262881-30262899 | GGAAAGTGAAACCCTTCC | + | 7.54 |
|
| Number of super-enhancer constituents: 49 | ID | Coordinate | Tissue/cell |
SE_01656 | chr20:30261809-30264949 | Aorta | SE_03156 | chr20:30261419-30265068 | Brain_Angular_Gyrus | SE_03894 | chr20:30259899-30271467 | Brain_Anterior_Caudate | SE_04818 | chr20:30251012-30278616 | Brain_Cingulate_Gyrus | SE_05813 | chr20:30250994-30271647 | Brain_Hippocampus_Middle | SE_06739 | chr20:30256527-30267510 | Brain_Hippocampus_Middle_150 | SE_07749 | chr20:30256426-30271516 | Brain_Inferior_Temporal_Lobe | SE_08789 | chr20:30262676-30264213 | Brain_Mid_Frontal_Lobe | SE_12541 | chr20:30262820-30263673 | CD34_adult | SE_12738 | chr20:30262699-30263257 | CD34_fetal | SE_12738 | chr20:30263321-30263650 | CD34_fetal | SE_13448 | chr20:30259763-30266214 | CD34_Primary_RO01536 | SE_14426 | chr20:30257012-30271334 | CD4_Memory_Primary_7pool | SE_18483 | chr20:30261088-30269159 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19226 | chr20:30261219-30264993 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20456 | chr20:30260085-30265113 | CD56 | SE_20764 | chr20:30261115-30270147 | CD8_Memory_7pool | SE_22440 | chr20:30260105-30271391 | CD8_primiary | SE_25330 | chr20:30259962-30278833 | DND41 | SE_28698 | chr20:30262664-30263525 | Fetal_Intestine_Large | SE_30903 | chr20:30261089-30265103 | Fetal_Thymus | SE_31430 | chr20:30261865-30265038 | Gastric | SE_34309 | chr20:30262490-30264853 | HCT-116 | SE_36989 | chr20:30262337-30265046 | HSMMtube | SE_39443 | chr20:30261311-30264932 | Jurkat | SE_39853 | chr20:30260148-30264978 | K562 | SE_40644 | chr20:30261776-30265010 | Left_Ventricle | SE_41648 | chr20:30262737-30263764 | LNCaP | SE_42121 | chr20:30261312-30265122 | Lung | SE_43515 | chr20:30261582-30265038 | MM1S | SE_45708 | chr20:30261712-30267501 | Osteoblasts | SE_47264 | chr20:30261487-30270363 | Panc1 | SE_48182 | chr20:30261855-30264471 | Psoas_Muscle | SE_49346 | chr20:30261840-30264952 | Right_Atrium | SE_49886 | chr20:30261073-30265055 | RPMI-8402 | SE_50155 | chr20:30261479-30264986 | Sigmoid_Colon | SE_51884 | chr20:30262674-30264258 | Skeletal_Muscle_Myoblast | SE_52373 | chr20:30261708-30265016 | Small_Intestine | SE_53471 | chr20:30261285-30265111 | Spleen | SE_55108 | chr20:30261709-30264877 | Thymus | SE_58612 | chr20:30249012-30312162 | Ly1 | SE_59155 | chr20:30248900-30312556 | Ly3 | SE_61228 | chr20:30249013-30312452 | HBL1 | SE_61455 | chr20:30248898-30312277 | Toledo | SE_62770 | chr20:30248811-30312352 | Tonsil | SE_63683 | chr20:30262660-30265047 | HSMM | SE_65412 | chr20:30262295-30264865 | Pancreatic_islets | SE_66334 | chr20:30261311-30264932 | Jurkat | SE_67146 | chr20:30261582-30265038 | MM1S |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I031672 | chr20 | 30259913 | 30270236 |
|
Enhancer Sequence | ACCTATAGTC CCAGCTACTC AGGAGACTGA AGTGGGAGAA TTGCTTGAGG CTGGGAGGTT 60 GAAACTGCAG TGAGCTGTGA CAGCACCACT GCACTCCAGC CAGGGCGACA GAATGAGACC 120 CCGTCTCAAA AAAAAAAAAA AAAAAAGGGA AGCCATTTTT AAGCCCCAGT ATGTTTGGCA 180 GCAAACCCCA TATTCTGAGC CAGGGCCATG GCCCTGGGTC TGTCAAGGAG GGTAAAGTAG 240 CCTGAGGCCA TCAGCTGAAT GAATAAGCAC TGGCTCCTGC CAGCTGAGGG GAACTGGTGC 300 CACAGGAAAA GGATGTGACG AAGACCAGGA GGGAAAGTGA AACCCTTCCG TCCTGGCTTC 360 AGTGAGGAAC AAGCATGCCT GTGCCAGACG AACCCTTCCT TCCTCTTGGG TGACTCTGGA 420 GGGCCCAGGC CCATTGCTTC CTTCCTGCTT GGTTATTTCA GGAAAGAGGT AGGTGGAGAA 480 GAGGAAGAGG CTACTAGCAG CCAGGAAAAG TGCCAGGGAC ACCAGAACTG TACCTTGTTC 540 TGTCCTTCTC ACATCCCTGC ATTGGCAGGC TGTGAGTCAC CTGCAGAGTC ACCTTATGCT 600 CCTGGCCTCA GTTTCCCTGA GGGAGAGGCT GATAAATGTG TGCTGAATAG ACAAACATGG 660 CCTTGCTAGA AGATCGCTGG GAGATGGTAG GAAGGGGGTA GGGCAAACGG AGAGGCCTTA 720 TCACTCTTTT GGCAGGGAGT TGCAGGCGGA GACTCGGAAG AAGTGAGGTT TGTGGTTGGA 780 ATCCACTTCC TCTGGTTTTC CCAGGGGAGC TGTTGGCTCC CGAGATGTGA GAAGAACATG 840 GCCTTTCTCC TCTCCCCCAC GGAAACATAG GCCTGGAGGT GGGCAACTTG GAGAAGCAGC 900 TCAGTGGAGG CAGGGCAAAG AGAGGGGTGG CAAGACTGTG TTGGGGTCAA CACCTCAGTC 960 CAGCCGGCCC AGGTATGGGT GGGTGCCACA GCAAGCCTTT TGGCTTCTGA GCCTCAGTTT 1020 CTCCTGCCTT GACCTCCCTA GCAGTAGTGG TGAGATCAGG GGGTGTCATA GAGGGCTCAA 1080 GCCATCTGGG 1090
|