Tag | Content |
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EnhancerAtlas ID | HS002-06003 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr20:30195990-30197240 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GLI2 | MA0734.2 | chr20:30196170-30196185 | AGCCCACCCACGGGG | + | 6.07 |
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| Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
SE_02970 | chr20:30195806-30196458 | Bladder | SE_02970 | chr20:30196535-30196961 | Bladder | SE_23092 | chr20:30191483-30197312 | Colon_Crypt_1 | SE_23905 | chr20:30191595-30196852 | Colon_Crypt_2 | SE_24856 | chr20:30191614-30197324 | Colon_Crypt_3 | SE_27857 | chr20:30191494-30200969 | Fetal_Intestine | SE_28873 | chr20:30191441-30200905 | Fetal_Intestine_Large | SE_31829 | chr20:30191527-30198255 | Gastric | SE_33920 | chr20:30191398-30196465 | HCC1954 | SE_33920 | chr20:30196505-30198178 | HCC1954 | SE_34238 | chr20:30189210-30201146 | HCT-116 | SE_34664 | chr20:30188903-30201189 | HeLa | SE_38269 | chr20:30190026-30200015 | HUVEC | SE_41187 | chr20:30191504-30197931 | Left_Ventricle | SE_42444 | chr20:30190458-30197675 | Lung | SE_44319 | chr20:30190053-30197222 | NHDF-Ad | SE_44941 | chr20:30190288-30197003 | NHLF | SE_47160 | chr20:30189148-30200294 | Panc1 | SE_48882 | chr20:30191499-30197316 | Right_Atrium | SE_50279 | chr20:30191498-30200037 | Sigmoid_Colon | SE_52484 | chr20:30191540-30200981 | Small_Intestine | SE_54437 | chr20:30191522-30197328 | Spleen | SE_55719 | chr20:30189887-30197322 | u87 | SE_57184 | chr20:30191494-30197271 | VACO_400 | SE_57391 | chr20:30193028-30196418 | VACO_503 | SE_57391 | chr20:30196475-30196854 | VACO_503 | SE_66900 | chr20:30191507-30197450 | H2171 | SE_67492 | chr20:30189887-30197322 | u87 | SE_68887 | chr20:30195904-30196997 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | ACCTCACGGA ATGTAGTACA GAATAAATGA AATAAAGTAA GTGTGTAAAA CGTTTAGCAC 60 AGTGCTTGGC ACAGAATGTT TCATAGTTAT AAATTATTAT TGTCGCCTGT GAGTCCTTGG 120 AGTGTCCTCG GAGGCACACG TGTGCACGCA CGCACTCTCA CGTGTGGGCC CCCGCCTGCA 180 AGCCCACCCA CGGGGTCTGA GCGGGTTCCC CCTCGCGTAC TCCGACATGC AGGGCCTTTT 240 TCCAGGGGAG GAAGGGGCTG CGGCGGGGGC CTGGGCCACC TCCCCCGCCA TTCAGGCACA 300 CTCTGGATTC CACGTTTCCC TCTGTTCCCC TTTGGCCCAG ACCCAGCCCA TCTGGAGGCC 360 GGCTCCGCGG CGGCCTGGGA GCGTTTCCAT CAGCTGGGCC CGAGGAATGC GGAGCTATTT 420 AACCTGAGCA TCCCCAGGTG TACGGAGGCG CCTGGCTGTC TGGGGCCCGC AGCCTTTGGC 480 ACAGCCGCGC TAGACAAACA GCGCGCCGCC CCCGCCCTGC CCCTCCGCCC CCAGCTGCAG 540 CCGGGCCTGG GAACCGGCGG GCGCCGGCGG CTTGCATAAG AGGCTCCGGG CCTCGCAGAG 600 GGAGGGGGGA CAGAGGCCAC CGGTGTGTGT GCATGTAACA CACAAAACCC TGCTCCTTTG 660 GAAATCATTA ACTCCTTAAC CCCTCCTGGA CAGGACGAAG CCAGGAGCTG GGGTGGAAGA 720 TGCCGAGAAA CCCGAGGACC AAGTTTCTTG GGCACTGGAC TCTGCCTTTC CGGGGCTGTA 780 CTGTTAATTT TATTTAAGAA ATACAGAGAG CTTATTGTGT GCTGGGCACC ATGCTAAACT 840 CTTTACAATA TCAATTCATT TAATCGTCAG AACTTGTTAA CGAGGCCAGT GCTATCATCA 900 TATGCTCATT TTAATAAGAG CAACCACCAC CACTACAACA AGAGTAATAG GCTAACATTT 960 TAGTAGGGAG GCAGGTAGAA CACAAGCCCA GAATCAACCT TGATGCTCAT CACTTCACCT 1020 GTCAGAGCCT CTTCTTTTTT GGAAAACGGG CTTCAGAACC TGGGCTTCAA GGATTAATTG 1080 AACCAATGCA CCTAAAAAGC ATAGCACAGG CTCATGGTAG ATACTTAGTG CATATTGCAA 1140 TAAAGTGTTT TGAGCGGATT GTCTCAACAG CCCTACCAGG TGTGGGCCTA CTGGTATATT 1200 CACTTTTTTG GTTTTTTTGA GACAGAGTCT CCCTCTATTG CCCAGGCTGG 1250
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