Tag | Content |
---|
EnhancerAtlas ID | HS002-05265 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr2:54806290-54807440 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF1A | MA0046.2 | chr2:54807149-54807164 | TGTAAATAATTAACA | - | 6.03 | HNF1A | MA0046.2 | chr2:54807149-54807164 | TGTAAATAATTAACA | + | 6.62 | HNF1B | MA0153.2 | chr2:54807150-54807163 | GTAAATAATTAAC | - | 6.13 | HNF1B | MA0153.2 | chr2:54807150-54807163 | GTAAATAATTAAC | + | 6.59 | NR2F1 | MA0017.2 | chr2:54806824-54806837 | CTGTTGACCTTTG | - | 6.78 |
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| Number of super-enhancer constituents: 54 | ID | Coordinate | Tissue/cell |
SE_00006 | chr2:54795695-54808079 | Adipose_Nuclei | SE_00896 | chr2:54806325-54806984 | Adrenal_Gland | SE_00896 | chr2:54806999-54807408 | Adrenal_Gland | SE_10400 | chr2:54805714-54810968 | CD19_Primary | SE_11005 | chr2:54790737-54825699 | CD20 | SE_11903 | chr2:54805104-54808137 | CD3 | SE_12885 | chr2:54806626-54807961 | CD34_Primary_RO01480 | SE_13387 | chr2:54804541-54808139 | CD34_Primary_RO01536 | SE_14098 | chr2:54806403-54807663 | CD34_Primary_RO01549 | SE_14488 | chr2:54805070-54807930 | CD4_Memory_Primary_7pool | SE_15498 | chr2:54806491-54807991 | CD4_Memory_Primary_8pool | SE_15859 | chr2:54805479-54807711 | CD4_Naive_Primary_7pool | SE_16386 | chr2:54805988-54807944 | CD4_Naive_Primary_8pool | SE_16936 | chr2:54805321-54807943 | CD4p_CD225int_CD127p_Tmem | SE_17333 | chr2:54793892-54821363 | CD4p_CD25-_CD45RAp_Naive | SE_17873 | chr2:54795021-54811216 | CD4p_CD25-_CD45ROp_Memory | SE_18341 | chr2:54795035-54821330 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19520 | chr2:54804469-54808160 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20164 | chr2:54795681-54809753 | CD56 | SE_20822 | chr2:54806095-54808244 | CD8_Memory_7pool | SE_21502 | chr2:54805963-54808154 | CD8_Naive_7pool | SE_21966 | chr2:54805854-54819252 | CD8_Naive_8pool | SE_22380 | chr2:54795196-54811289 | CD8_primiary | SE_23128 | chr2:54806279-54807871 | Colon_Crypt_1 | SE_23914 | chr2:54806299-54806908 | Colon_Crypt_2 | SE_23914 | chr2:54807139-54807736 | Colon_Crypt_2 | SE_25070 | chr2:54803569-54807926 | Colon_Crypt_3 | SE_25877 | chr2:54804084-54808059 | Duodenum_Smooth_Muscle | SE_27348 | chr2:54806258-54807572 | Esophagus | SE_27627 | chr2:54794756-54809409 | Fetal_Intestine | SE_28537 | chr2:54794775-54810703 | Fetal_Intestine_Large | SE_29772 | chr2:54804536-54807845 | Fetal_Muscle | SE_31160 | chr2:54805683-54808040 | Fetal_Thymus | SE_31545 | chr2:54806192-54807558 | Gastric | SE_32493 | chr2:54794685-54809919 | GM12878 | SE_38000 | chr2:54803941-54807936 | HUVEC | SE_39396 | chr2:54803412-54807973 | Jurkat | SE_40773 | chr2:54803413-54806814 | Left_Ventricle | SE_40773 | chr2:54806843-54807511 | Left_Ventricle | SE_42137 | chr2:54806257-54807405 | Lung | SE_43945 | chr2:54806647-54807844 | MM1S | SE_46220 | chr2:54804531-54807869 | Osteoblasts | SE_47832 | chr2:54806462-54806827 | Pancreas | SE_47832 | chr2:54806982-54807394 | Pancreas | SE_49907 | chr2:54803392-54808037 | RPMI-8402 | SE_50115 | chr2:54803395-54807898 | Sigmoid_Colon | SE_52386 | chr2:54803599-54807890 | Small_Intestine | SE_53342 | chr2:54806289-54807792 | Spleen | SE_55277 | chr2:54806481-54807552 | Thymus | SE_60008 | chr2:54784446-54818579 | Ly4 | SE_61167 | chr2:54784367-54847020 | HBL1 | SE_61474 | chr2:54749764-54818736 | Toledo | SE_62304 | chr2:54783676-54846716 | Tonsil | SE_66257 | chr2:54803412-54807973 | Jurkat |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr2 | 54806490 | 54806642 | chr2 | 54806978 | 54807402 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH02I054566 | chr2 | 54794112 | 54810964 |
|
Enhancer Sequence | CTTCCTAGGA GTTTCTCTAG CTCATGACCT CTTTTACCTT TACTTTCAGT TGCAGTGTTC 60 TTAGCTCATA GAAGGAGCTT TGACGGCACA TAGAATGAAG TATAACAGCT TCCGTTTGAC 120 CTGAGGCATC CCTCAGGTAT GAGAATGTCA CCCAGAGATC GAATACAGTG CCAGGTTATC 180 AACTACCATT TTTTGGGACT GATTCTCTGC TCATGTGTGA CCATTATTTG GGGAAATCAT 240 ACAGTACCAC AAACCAGAAG TTTCTGAAAA CACCTAAACT CCCCATCTTT CACACTCACC 300 CATAGGGACC GTGGCCCCCA ATGAGGGGTA GTTCGTCTCT GTATTGGTAG CATTAGCGCA 360 CGTGCTATAT AGCTCTCTTA ATACCTGAAC TGTGGACAGA CCAGATCCTC ACTGAGCTGA 420 AGCACATTGG CATATTAAGG GAGCCCAGCA TTGCTGTTTG GCCCTGCTTT TGAACTGGGA 480 AGATATATTG CTGCATGGAG TTCTGAAAAG TACCTTTGTA AGTCCCGAGA ACTCCTGTTG 540 ACCTTTGGAT TTAGGTAAAA TGTAAGTCTT AGGAGAATTG ATGAGAATGT AGGAACCAGT 600 TTTAGCCAAT GCATTAAGAC TAAAATGACT CTATTGTTTG TCAGGCTTTG CCAGAAAGTA 660 TAGTGAGAGA GAGAGATCCT AAAACTCTGA AAGCAAATAG CCCACAGCAG TTAACTGTAT 720 TGACTTTGGA AACAGGTTAT AAACCCAAAC CTCTGTGCTG AACTTGAATG GGTGTTTCTT 780 CTCTCCTTTC TGAGGGTAAA AGCTGCTGGT GAGAACGGCT CTCTGGTGTT GCTAGGACAG 840 ACCTGTATGA CCTTCTTTAT GTAAATAATT AACAGGGGAA TATTTTCATT TACGTTAAAG 900 CCATATATGA GAGAGATTTC CGGGCTGGCT CTGACAGCCT CTGGCCCCAC TGGAGAAGGA 960 AGCCAGCACT GAAAAAATTC AAGCTTCCGG CCACACGGAA CCTGAGAATA TTCTCTATGA 1020 CAGCAGTGGC TGTGAAGCTG TTTCTTTAAA GTAAAACCCC TTTTGAAGGT TAGTCTGGGG 1080 TGACTTTACT GTTACATAGG GAGTAGATTT TGTTTCTTGA TGGTTCGTTG AGTGGTAGAG 1140 AGGTTAAAGG 1150
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