| Tag | Content |
|---|
EnhancerAtlas ID | HS002-04920 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr19:33531940-33533080 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| FOXP2 | MA0593.1 | chr19:33532688-33532699 | TTTGTTTACTT | - | 6.62 | | HES2 | MA0616.2 | chr19:33532960-33532970 | GGCACGTGCC | + | 6.02 | | HES2 | MA0616.2 | chr19:33532960-33532970 | GGCACGTGCC | - | 6.02 | | NKX2-3 | MA0672.1 | chr19:33533006-33533016 | ACCACTTGAA | + | 6.02 | | RREB1 | MA0073.1 | chr19:33532089-33532109 | CCTCCAAACATCCCCCACCC | + | 6.14 |
|
| | Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
| SE_23354 | chr19:33531310-33533037 | Colon_Crypt_1 | | SE_24632 | chr19:33531833-33532986 | Colon_Crypt_2 | | SE_24867 | chr19:33531356-33533794 | Colon_Crypt_3 | | SE_27867 | chr19:33529698-33533862 | Fetal_Intestine | | SE_28788 | chr19:33529691-33534092 | Fetal_Intestine_Large | | SE_32296 | chr19:33531754-33533737 | Gastric | | SE_33901 | chr19:33530645-33533837 | HCC1954 | | SE_35571 | chr19:33529621-33533888 | HepG2 | | SE_42005 | chr19:33532234-33532844 | LNCaP | | SE_47226 | chr19:33529418-33544806 | Panc1 | | SE_50977 | chr19:33531317-33533825 | Sigmoid_Colon | | SE_52660 | chr19:33530653-33533813 | Small_Intestine | | SE_56754 | chr19:33531354-33532337 | VACO_400 | | SE_56754 | chr19:33532345-33533023 | VACO_400 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I033039 | chr19 | 33529636 | 33535923 |
|
Enhancer Sequence | ACTCCCAGCT GGAATGGATC AGAGAAGGGG AAGACTTTGA AGGATCATAA AATCTGGTTT 60
TTCAAGTGCC TGCCTAGCCA CGATACCCTC TGACAGTCCT CAGATAAGGG CTTAGCACCC 120
CCATTTCCAT TCCTGCATTT CTGGGGACAC CTCCAAACAT CCCCCACCCC TATTCCAACA 180
GATCTACTTT CCTTTGGGGG CTGCGGTAGG AAACCTGGGA ACCAGAAGAC AAACAGAAGG 240
AAAGCAGGGC CTAATTTACA ACTGAAACCA CCCATGGCCT GCAGAGACAG CCACGTAATG 300
GGTCGCCCAG GGACACTGAG GGGCCAGAGC GGAGCTTGGC AAAATGCCCT ATTTGTTTTC 360
GGGAAACCGT TGGTGCTTGT TGAGTCAGAT TAATAAATAC CTTCAGGGTT TCCTCTGACA 420
ACATTCTCCA GCAAGGGGTA CTTTGAACCT TTAGGCCACT GTGAGAATCA TTAACAACCC 480
CCCACTCCTG CCCCTGCCAA CCCAACCACT GCCAGTTTAA CAATGAGCTT GAGTCAGGCT 540
CGGGCCTCAG AAAGGGTGAC TGCTGTTGTC GTTAAGAGAA CAAGGCACAC AAAACTGCCC 600
TAGTTCCTGC CTGAGAAAGT CCAAGTTCCC TGCTCACAGG GGCCTCTCTG ACCACCCTCT 660
GTCTCTAAGG CTGGCCATCC TGGGCCAACC TCTATGATAT TCAGAGTTCA TTATTCCCTA 720
GAAAACATCA CTTCCCTAGG TGATCTGATT TGTTTACTTG TCTATAAAAG TCTCCTCCCA 780
TCCTCCAACA AGAGAAATCA CAAAAGCAGA GCCTCGCCTG ATCTTCAGGC ACCTCAACTG 840
TGCCTGCCAC TTAACAGGTG CTCAATAGCC AGGCACAGGG GCTCACTCCT GAAATCCCAG 900
CACTCTGGGA GGCTGAGGCA GGAGGATCAC TTGAGGCCAA GACTTTGAGA CAAGCCTGTG 960
CAACACGGTG AAACCCTGTC TCTACTAAAA CTTTAAAAAA TTCAATTAGC CAGGTGTGCT 1020
GGCACGTGCC TGTAGTCCCA GCTATTTGGG AGGCTGAGGC AGGAGAACCA CTTGAACATG 1080
GGAGGCAGAG GTTGCAGTGA GCCAAGATTG AGCCATTGCA TTCCAGCCTG GGCAACAAGA 1140
|
