| Tag | Content |
|---|
EnhancerAtlas ID | HS002-04845 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr19:13242820-13243430 |
Target genes | | Number: 21 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr19:13243013-13243028 | GAGGTCAGTAGTTCA | + | 6.07 | | RARA | MA0729.1 | chr19:13243013-13243031 | GAGGTCAGTAGTTCAAGA | + | 6.1 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_04421 | chr19:13243243-13244946 | Brain_Anterior_Caudate | | SE_06231 | chr19:13243133-13244722 | Brain_Hippocampus_Middle | | SE_07309 | chr19:13243202-13245311 | Brain_Hippocampus_Middle_150 | | SE_08538 | chr19:13243215-13247140 | Brain_Inferior_Temporal_Lobe | | SE_14456 | chr19:13243189-13244042 | CD4_Memory_Primary_7pool |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH19I013130 | chr19 | 13241784 | 13242879 | | GH19I013132 | chr19 | 13243032 | 13244153 |
|
Enhancer Sequence | CCGGCCACCA CACCCAGCTA ATTTTTGTAT TTTTAATAAA GATGGAGTTT CACCGTGTTT 60
GCCAGGCTGG TCTCGAACTC CCGACCTCAG GTGATCCACC TGACTCGGCC TCCCAAAGTG 120
CTGGGATTGG CCAGGTGTGG TGGCTCATGC CTGTAATCCT ACACTTTGGG AGGCCAAGGC 180
AGGTGGATCA TTTGAGGTCA GTAGTTCAAG ACCAGCCTGG CCTATGTGGT GAAACCGCAT 240
CTCTACTACA AGTACAAAAA TTAGCCGGAC ATGGTGGCAC ACGCCTGTAG GCCCAGCTAC 300
TCAGGAGGCT GAGAATCACT TGACCCTGGG AGGCGGAGGT TGCAGTGAGC CGAGATGGCA 360
CCACTGCACT CCAGCCTGGG TAACAGAGCA AGACTCTGTC TTAAAAAAAA AAAAAAAAAA 420
AAAAGTGCTG GGATTACAGG CTTGAGTCAT CCCGCCCTTC AGGACATATC TTTTGAATTT 480
TGAACCTGGT GAATGAATTT TTAGATGACC TCAGGACAGT CCTCAATTTC CACATGACCT 540
CAGTTTTTCC AGCTTTGCAA GGGGAGTATG AAACCAGCCC TGAAGTCTTG CTAAGAGGAT 600
TCGGGGAGCT 610
|
