EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS002-03678

Organism

Homo sapiens

Tissue/cell

A375

Coordinate

chr16:1992470-1993100

Target genes

Number: 24
Name	Ensembl ID

MAPK8IP3	ENSG00000138834
FAHD1	ENSG00000180185
HAGH	ENSG00000063854
MSRB1	ENSG00000198736
RPL3L	ENSG00000140986
NDUFB10	ENSG00000140990
AC005363.9	ENSG00000255513
RPS2	ENSG00000140988
SNHG9	ENSG00000255198
TBL3	ENSG00000183751
NOXO1	ENSG00000196408
GFER	ENSG00000127554
SYNGR3	ENSG00000127561
AC005606.14	ENSG00000261790
AC005606.15	ENSG00000260107
NPW	ENSG00000183971
SLC9A3R2	ENSG00000065054
TSC2	ENSG00000103197
NTHL1	ENSG00000065057
RP11	ENSG00000261123
PKD1	ENSG00000008710
RAB26	ENSG00000167964
TRAF7	ENSG00000131653
RNPS1	ENSG00000205937

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZEB1	MA0103.3	chr16:1992548-1992559	GGGCAGGTGGG	-	6.14
ZIC3	MA0697.1	chr16:1993056-1993071	CGCCCCCCGCCGCGC	+	6.04

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_47923	chr16:1990231-1993294	Pancreas
SE_48475	chr16:1990269-1995254	Psoas_Muscle

Enhancer Sequence

TCCTGCCTGC CTGGTCAAAC TTCACGGGCT GTTGGCAGGT GCCTGGTGGC ACTCCTGGTT 60
CCCCAATTTG GAGTCCCTGG GCAGGTGGGG AGGCACCTGG GCCGGCACAT TAGGATCTGA 120
AGGGGACATT CTATGCTTGC CAGACTCCTC CCAGAGATCC CGGACTCGGG GGAATGGGAA 180
GGGCCAGGGT AACACCTGCG GGATGACCCG CGAAGGGGCG CCCCGGCCAC AGGAGCTGGC 240
CCTGGACAAG AACCTGGCCT CTCCGAAGCC CCGACCCTAA CCCGAATTCC CCCAGCGCCA 300
TCACTTTGGA GTGTAGGGGG TAGGGAAGGG GTACCACCCC CACGTATCCC GATCCCTTAG 360
ACCCACCCCC GAAACGGCAC GTTCACACTC GAGGCCTGCC CCCTCCAGGA CGGTGAGCCC 420
CAAGGCCCCC TCTCCTCGGG TACCCCACTC TCCTCGCCCC CAGGCTCCCC ACTCCTCCGC 480
AGTCCTTTTG ACCCCTGTTC GCTTCTCCCC GGCAGCCACA TTCGCCCCCA TTCCCGGCTT 540
GGGAGAGACA TCACCCCCGG ACGACGGCGG CGCCCCCGCT AATGCGCGCC CCCCGCCGCG 600
CTGCCCTCCC AGCGAGAGGC CGCAGGACCA 630