| Tag | Content |
|---|
EnhancerAtlas ID | HS002-02879 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr13:52206940-52207880 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| LBX2 | MA0699.1 | chr13:52207670-52207680 | GCTAATTGGC | - | 6.02 | | NFIC | MA0161.2 | chr13:52206988-52206999 | TCTGCCAAGTA | - | 6.62 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_03707 | chr13:52206521-52207908 | Brain_Angular_Gyrus | | SE_04573 | chr13:52206237-52209039 | Brain_Anterior_Caudate | | SE_05480 | chr13:52206126-52208623 | Brain_Cingulate_Gyrus | | SE_07504 | chr13:52205735-52214310 | Brain_Hippocampus_Middle_150 | | SE_08575 | chr13:52206462-52208303 | Brain_Inferior_Temporal_Lobe | | SE_09352 | chr13:52201832-52211453 | CD14 | | SE_35418 | chr13:52205550-52208347 | HepG2 | | SE_37711 | chr13:52205179-52208309 | HSMMtube | | SE_46288 | chr13:52202699-52208694 | Osteoblasts | | SE_52202 | chr13:52206681-52207724 | Skeletal_Muscle_Myoblast | | SE_64009 | chr13:52206667-52207801 | HSMM | | SE_64888 | chr13:52205220-52207240 | NHEK |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH13I051630 | chr13 | 52204705 | 52207863 |
|
Enhancer Sequence | ATACTGGGTC TTTCCCCTGT CTAGTTTGCT AGCTTCTCTG TTCACTCATC TGCCAAGTAG 60
GTCTAATTTG TTCATTATTG GTAACTGAAA TATGCTTTGT CAGAGGTTGT GTAGGTCATT 120
ATTCAGTTCT TTTCATTCCA GGCAAAAATA GGGAAAAACG TTAGATTTAC TGTGATTTTT 180
TTTATCTGCA GCTTAGAGTT CTAATAGTTT GTGTGGGGCA GGGTTGAAGC TGTAGGCAGT 240
GGGAGACAAC TGCAGGGCAG ACTTTGTCTT TGTTCAGGAA CAGTGTTCCT TTTGTGTCTG 300
CCTTGGCAGC TTCTGGCCCG CTGGGGTAGT TTCCCTTCCC CCTGAATAGC TGCCTGGCCT 360
AGGCATCCAG GCAGAAACTC CAACCAGCAT GGCTGCTGCT CCAGCACTGG CCTGGCCTCC 420
AGCCTCTGCT CCAACCCTGG AGCTGTCAGT AGGCTCTGAA GTGGGGATCC TGGTGGACTT 480
GGCCACCCCA TGTGTAGTGG AGTGATTAAG AGTTTAAACT TGAGTCTGAT CGCCTTTGTG 540
TTCCAATCTT GGTTGTGCTA CTTGAGAACT GTATAACATT GGTCATCTTG TTCAACTTCT 600
GAGCCCCAGT TTACTCGTGT GTATAATAAT ATTGAAATTT GTTAACGGCT TAAGGCACTT 660
AGTAGGGTAT CTGGATCTAA ATAATTGATG AATGGCAGCA GTTTTGTTGT GGGTGTTCTG 720
GGAACTGGCT GCTAATTGGC CTCTCCGCTC ACTCTGCTGT TTGCTAAATT ATTCCTGTTA 780
GCTCTTCTCA AGGGGTCACT TTTGTGGATG GGTCACTTAT GAAGTAGCCA GTCAGTGGTG 840
GAGACTTTTT TTCTCCTGAA TTAGTTGGAT CATTTTAGCA AGAAGTGATG AGGGGAGGGA 900
GTCACATGCA TCATCTTGAT TCTAGACCAT CACAGGTAAT 940
|
