Tag | Content |
---|
EnhancerAtlas ID | HS002-02451 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr12:53297030-53298440 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RREB1 | MA0073.1 | chr12:53297631-53297651 | CCCCACCCCAGCCCACCCCA | + | 6.18 | RREB1 | MA0073.1 | chr12:53297641-53297661 | GCCCACCCCACCCCACCCCA | + | 6.1 | RREB1 | MA0073.1 | chr12:53297645-53297665 | ACCCCACCCCACCCCACCCC | + | 6.22 | RREB1 | MA0073.1 | chr12:53297650-53297670 | ACCCCACCCCACCCCACCCA | + | 6.22 | RREB1 | MA0073.1 | chr12:53297651-53297671 | CCCCACCCCACCCCACCCAC | + | 6.67 | RREB1 | MA0073.1 | chr12:53297636-53297656 | CCCCAGCCCACCCCACCCCA | + | 6.8 | RREB1 | MA0073.1 | chr12:53297646-53297666 | CCCCACCCCACCCCACCCCA | + | 7.67 | RREB1 | MA0073.1 | chr12:53297656-53297676 | CCCCACCCCACCCACACCGC | + | 7.67 | ZNF143 | MA0088.2 | chr12:53297301-53297317 | TTCCCACAATGCCTCC | + | 6.01 |
|
| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_23067 | chr12:53293079-53302882 | Colon_Crypt_1 | SE_23787 | chr12:53296755-53298845 | Colon_Crypt_2 | SE_24992 | chr12:53296540-53299679 | Colon_Crypt_3 | SE_27647 | chr12:53288696-53303037 | Fetal_Intestine | SE_28539 | chr12:53288457-53303256 | Fetal_Intestine_Large | SE_31746 | chr12:53295793-53302843 | Gastric | SE_34646 | chr12:53296478-53303608 | HeLa | SE_43420 | chr12:53296705-53297615 | MCF-7 | SE_43420 | chr12:53297676-53298740 | MCF-7 | SE_47304 | chr12:53292933-53302628 | Panc1 | SE_47563 | chr12:53297064-53298856 | Pancreas | SE_50235 | chr12:53293003-53302879 | Sigmoid_Colon | SE_52377 | chr12:53291888-53302844 | Small_Intestine | SE_56763 | chr12:53296731-53299669 | VACO_400 | SE_57363 | chr12:53297031-53298834 | VACO_503 | SE_57922 | chr12:53296950-53298736 | VACO_9m | SE_65517 | chr12:53295161-53302467 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | TATGGATTTA GGGGCTCTCA TATTCATTTT ATAGATGAGG AAATAAGACT TGGCAAGGGA 60 GTCCATAACC AGGAACCGGC AGAGCAGTGC GAACCAAGAA TTCAGATTCC AAAGCCTATG 120 CTTAGCTGCT CTCTATAAGG ACCCCAGGGC TAGCAAAACG CAGTCAACAA GTCAAGTCCA 180 GGCGCTTGGA GCGCCAAGGG CCCCCGACCA CTGGGTTCCT GGGGCTCCGG TTCCTCCCGG 240 CTTACTCTGC CCCAGGATTT CCCTCCTCCC GTTCCCACAA TGCCTCCCAG GAGCCAGTCA 300 GCGTGAAGGG CCCAATCCTC GGGGCCGCCG GGGGCCCGGG GCCCCTCAGG CAGCGGAGTC 360 CCAGGGCTGC AAAACCCGGC CTGGCTCCTG CTGTGTGAAA GTGGAGCCAG GCCGCTGGGG 420 CGGAGCAGGG ACAGGACGCG AGAAAGGGAC ACGGGCTGAA TGGGCGAGGG GCGTTGGTGG 480 GCGACCGCGT TATCTGAAGC CATAAACTTA ACAGGACGTA AACCCCGGGC GGGGCGTCCC 540 ACGCCCGCAG ACTTTGAATC CTGCATGGGC TTTCCGAGGC CAGGCCCTGG CGCCTCCTCC 600 ACCCCACCCC AGCCCACCCC ACCCCACCCC ACCCCACCCA CACCGCCCCC GACGCCGAGC 660 TCCGCCAGGT GGAGGAGAGC GTCCCGAGAC TGCTGCCCGC AGCCCCTCAC CCCGCCCTCG 720 GCCCCGCCCA CGCTGCCGGC GCAGGGGCCG GGGTATGACT CATTCTGTGA CCCCCGCACT 780 CAGGCCTCCG GGCGCCAAAG GCCTCAATCA ATATTTGCCC GTTTGAACCG AGACACCCAC 840 TTCCTTCTCC TAGAATGCTA GAATCACACC AAACCCCTAT GTAAAAAAAA GAAAAGAAAG 900 AAAAAAAATC ACAAAGGCAC CACTGGGGAG CCCTTGGGGT AGTGCTGGCG AAGAGGCGAA 960 CCTGGAGGAG GGTAGTCCCC GAACAGCTGG GACTGCCGCA GGGCGATAGC TTAAAAGACG 1020 GTCAGAACTC GGGTTGGGGT GAGAACAATA ACCGCTATTA TTTTTTATAA TTTGGGGACA 1080 GAATGACCTG AGGAAGAACG GGATTTGTAG AGAGGGGTGG TGGGAACTAG GCTGTACCCT 1140 TAAGTTGTCT CTCTCTTCCA AGACCCTCCA GTTTAAAAGG GAAGAAGGAA GCCCCAGGAT 1200 TCATCCCGGC TGTCCAGACC CTCTCCCCAC CCTCACCCAG CCCAAACCAA GGTGCACGGG 1260 AGGGGTGAGT CGGAGGATGG AAGGGAGAGT GTCGCCAGGG CGGGTGAGGC CCAGCAGGAC 1320 GCCAGCTGGG GGCTGGAGAT GTGCATAGGG ACCGGGACTA CCAGGAGAAA GGGGCTGCGG 1380 GCACAGTCAG CCACGCAGGG GGGACCCTCA 1410
|