Tag | Content |
---|
EnhancerAtlas ID | HS002-01162 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr1:223902450-223903950 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
TP53 | MA0106.3 | chr1:223903596-223903614 | TGCTTGCCAGGGCATGTT | + | 6.17 | TP53 | MA0106.3 | chr1:223903596-223903614 | TGCTTGCCAGGGCATGTT | - | 6.32 |
|
| Number of super-enhancer constituents: 35 | ID | Coordinate | Tissue/cell |
SE_00224 | chr1:223891886-223912166 | Adipose_Nuclei | SE_01908 | chr1:223903739-223904850 | Aorta | SE_02306 | chr1:223899487-223903687 | Astrocytes | SE_04026 | chr1:223903291-223905474 | Brain_Anterior_Caudate | SE_05036 | chr1:223902343-223904766 | Brain_Cingulate_Gyrus | SE_05972 | chr1:223899184-223905867 | Brain_Hippocampus_Middle | SE_09681 | chr1:223899395-223907924 | CD14 | SE_19702 | chr1:223899422-223907008 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_23408 | chr1:223902389-223903605 | Colon_Crypt_1 | SE_24051 | chr1:223902436-223903004 | Colon_Crypt_2 | SE_24051 | chr1:223903089-223903543 | Colon_Crypt_2 | SE_25230 | chr1:223902434-223903064 | Colon_Crypt_3 | SE_26209 | chr1:223899230-223905388 | Duodenum_Smooth_Muscle | SE_26925 | chr1:223899336-223904834 | Esophagus | SE_31491 | chr1:223898405-223906097 | Gastric | SE_33950 | chr1:223900271-223904290 | HCC1954 | SE_34545 | chr1:223899419-223904575 | HCT-116 | SE_34979 | chr1:223899218-223904777 | HeLa | SE_36294 | chr1:223899426-223904613 | HMEC | SE_37129 | chr1:223899390-223911201 | HSMMtube | SE_38254 | chr1:223899363-223904539 | HUVEC | SE_38957 | chr1:223902403-223904692 | IMR90 | SE_42269 | chr1:223902366-223906841 | Lung | SE_44530 | chr1:223900206-223905349 | NHDF-Ad | SE_44904 | chr1:223902263-223903610 | NHLF | SE_45872 | chr1:223899383-223910101 | Osteoblasts | SE_50365 | chr1:223899342-223907084 | Sigmoid_Colon | SE_51879 | chr1:223902338-223905051 | Skeletal_Muscle_Myoblast | SE_53249 | chr1:223902420-223905033 | Small_Intestine | SE_55958 | chr1:223898795-223906601 | u87 | SE_63671 | chr1:223902338-223906710 | HSMM | SE_64794 | chr1:223900231-223904926 | NHEK | SE_65644 | chr1:223902687-223903954 | Pancreatic_islets | SE_67677 | chr1:223898795-223906601 | u87 | SE_68376 | chr1:223892363-223922876 | TC32 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 223903033 | 223903347 | chr1 | 223902800 | 223903000 | chr1 | 223903000 | 223903425 |
|
Enhancer Sequence | GCATTTCTCG AATACCTACT ATATGCTGGG CACAATGCAT ATGGTTTCTG CTTCTGAAGA 60 CTTACTTCTG AGGCTAGTGA GGGGACAGAG ACAGGTCCCC CAACAGTTGG AAATGCCTGT 120 GGGACTTCCA GATGAGGATG TAGAGGTCTA GAGATGATCT AGCGCCACTG CTTAGGGCAG 180 GCGGGCTGTG CACTGCACAA CTAAGGAAGA GTGTGACTTT TACGATCCCC ATTTGCCAGT 240 TGAAGAAATT GAGGCTTGGG AAGGTTAAAT ACTTGCTCAG AGTCAAGTGG ATATAGGGCA 300 TAGATCCAGG ACTGTGTGTA GTCTGTGCAT GTTGAGCCTA CCCCTTATGG CTGCGCTCTC 360 TGCCTCCTTC CTACCTTCTC AAATGCTGCT GAGGTCAGGC AAGGGGAGCA CAGTTGTTTC 420 CGCTGGATTT GAACACTAGC AAGTCATTGG TGAGTTTAGC AGAGCAATTT CAATGGAAAG 480 GTGAGAGTAG AAGCCAGATT GTTGTAGACT CCAGAGTAAA GGAACTGGAA ATTAAGAACA 540 TGATCAACTT ATTTAAGAAG GACCCCCGGG AAGAGAGGAG AACTGATAGG TAGAGTAGGA 600 CCTGGACTTT GAGAGCCTGT GTTTTTTTCA TATGAGAACA ACTTGAATGT GTCATATGTT 660 GAATCACCAG GAAGAAGGGA TTAAAGATAA AGGCAGGGAG GGGGCAGTGA AACAGGATCC 720 CTGAGGAAGT GAGAATACGG GTTGTGGGCA GGGGAGGGGA GCAGGTTAGC CTTGCAGCAG 780 GAGGAGCTGC TCTTCCTCGG AGAGAGGATT TCACAACACT GGCAAGAGTG GCTCCAGTGC 840 CTGGAGCGGG GATTAAAGCA GTAAGTCCAG TGGGGTCCAA GGGCCATGCA GGGGTACAGT 900 GAGGAGAAAG CAGGTGTGAT CCGGGTGGCA CATCAGATCC TTCCAGCAAC CAGTCTGTTA 960 GGAGCAAGGG CAGATGTTGT GAGCCCCTAT GTTTCCCCCA AGAAAATCAA ACCTCTGAGA 1020 GGTTTCTCAC TTGCTTATCT TCAGCTGGCC GAACTCAGCC TCAAACCCAT ATGTCCTGTC 1080 TCCAAGTTCA GTGACTGTTA TCATCAACTT CTTCAACAGT AATAATAATA GATCACATTT 1140 ATGGAGTGCT TGCCAGGGCA TGTTTACATC ATTATCTCAT TTAACACTCA GAACAATCCT 1200 CTGTGGTGGG TGTTTTCATC GTTCCCATTT TGCAGGTGAA AAAACTGAGA CTTCAAAAGG 1260 TTAAGTGACT TCCCAGGGTC CTACGACCTA CATAATAAGT GGCAGAGCCA GGATTCAAAC 1320 CTAGGTTATC AGAATAATGC AGCAAAGCCC AAACCCTCAG CCCCTTTTCA CTGACTGGTA 1380 AGACCCATAT TTAATTCGAT GCCCTACATG CCGTGCACAA GTTTCAGTTT TCTGAAGCAT 1440 CGCTTAGATG CTTAGGTGTT TAGCACCACT CTGAACTCTG ACTTTTCTAG AGAGGCTGCT 1500
|