| Tag | Content |
|---|
EnhancerAtlas ID | HS002-00980 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr1:201459470-201460380 |
Target genes | | Number: 10 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Six3 | MA0631.1 | chr1:201459973-201459990 | TGATGTGATACCCCATA | - | 6.21 | | ZNF263 | MA0528.1 | chr1:201459871-201459892 | GGAGGAAAAAGAAAAGAAGGG | + | 6.34 | | ZNF263 | MA0528.1 | chr1:201459868-201459889 | GGAGGAGGAAAAAGAAAAGAA | + | 7.41 | | ZNF263 | MA0528.1 | chr1:201459865-201459886 | GGGGGAGGAGGAAAAAGAAAA | + | 7.42 |
|
| | Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
| SE_00341 | chr1:201458403-201459656 | Adipose_Nuclei | | SE_01720 | chr1:201456566-201460394 | Aorta | | SE_03288 | chr1:201459529-201460096 | Brain_Angular_Gyrus | | SE_04052 | chr1:201459285-201460321 | Brain_Anterior_Caudate | | SE_04842 | chr1:201448443-201471134 | Brain_Cingulate_Gyrus | | SE_05817 | chr1:201447914-201479638 | Brain_Hippocampus_Middle | | SE_06742 | chr1:201448865-201477808 | Brain_Hippocampus_Middle_150 | | SE_07798 | chr1:201448554-201479644 | Brain_Inferior_Temporal_Lobe | | SE_26585 | chr1:201456552-201460495 | Esophagus | | SE_32167 | chr1:201459121-201459899 | Gastric | | SE_34202 | chr1:201458524-201459614 | HCC1954 | | SE_34751 | chr1:201456558-201463441 | HeLa | | SE_38401 | chr1:201457529-201466376 | HUVEC | | SE_42560 | chr1:201457647-201460167 | Lung | | SE_45671 | chr1:201456478-201462527 | Osteoblasts | | SE_49100 | chr1:201459128-201460325 | Right_Atrium | | SE_50506 | chr1:201457531-201460516 | Sigmoid_Colon | | SE_52849 | chr1:201457835-201460406 | Small_Intestine | | SE_54460 | chr1:201457731-201460272 | Spleen | | SE_54518 | chr1:201448446-201479292 | Stomach_Smooth_Muscle | | SE_55901 | chr1:201457225-201460094 | u87 | | SE_67648 | chr1:201457225-201460094 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 201459934 | 201459979 | | chr1 | 201460113 | 201460360 |
|
Enhancer Sequence | CACTGTGGAG GGGAAGGGGA AGCGGACGCA TTGAGTTGAA GCTGGGGTGA CCTTCTTGCT 60
CATTGCAAGC TTCTTACAGC TGAAGCTCTC TGGCCTCTTT GCATACATAA TATCCTGATC 120
TTTCAGGAAC TGTCTACAAA TGGAGGCAGG CGGGATGGCC AATGGGTGGG AGGACAGAGG 180
GATGGGATCT GCATATCCGA CTCTAGAAAT GCTGGCCAAC ACCAATTCCT CTTCCAGGAA 240
TCCATATGTG TCTCCTTTGG TCCTCTGCAC CCCTAAACTT CCTCAGGCTG CAGTGCAACA 300
CAGGGTTCAG AGGCAACAGC CTAGGCTGAC CCCAAGCCAC AGGACGCCTG TTGAGGTTCC 360
TCACTCTGCC CTCAACAGAG ACCATATGTC CCAATGGGGG AGGAGGAAAA AGAAAAGAAG 420
GGCAGTTTTC CTGCCTTCAA CAGTGGAATC CAGAAGAGAC TATCTGTGCA TGTTGGCAGG 480
GAGCCAACGG GGGGAGATGC AGGTGATGTG ATACCCCATA AGAAATGTTT AACATTTATT 540
AAGTGCCCAA CATGGTGGGC TTTGAAATGG GATGCAGCTC ATGCTAATCA CAAGAGGATT 600
TGAAGTTTCT AATCTCAGAA ATCACTTTAC CACAGGAAGA AGTGAGGGTC AGACACAGAA 660
GAACTTCCTG ACTCCTGGGG TAAGAGAGAG TGGAACGGAA GGAACTAGGG ATTGCAATGG 720
TCTGAGCTGG AAAGGCTGTG GGCCTCATAT TTCGTCCTGT TAATCTCAGA GGGGAGCTAT 780
GCCCAGCTAT CCAGAATAAA ACAGTTTGGG CTGGGTGCAG TGGCTCATGC CTGTAGTTCC 840
AGCAGTGGGA AGCCAAGGCT GGAGGATTAC TTGAGCCCAG GAGTTTGAGA TCAGCCTGGG 900
GAAGATGGCA 910
|
