| Tag | Content |
|---|
EnhancerAtlas ID | HS002-00859 |
Organism | Homo sapiens |
Tissue/cell | A375 |
Coordinate | chr1:169085010-169086070 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:169085745-169085766 | CAGCAGTTTCAGTTTCATCTT | + | 6.85 | | IRF8 | MA0652.1 | chr1:169085749-169085763 | AGTTTCAGTTTCAT | - | 6.74 | | IRF9 | MA0653.1 | chr1:169085749-169085764 | AGTTTCAGTTTCATC | - | 6.04 |
|
| | Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
| SE_03294 | chr1:169084995-169085810 | Brain_Angular_Gyrus | | SE_04209 | chr1:169084758-169087150 | Brain_Anterior_Caudate | | SE_04970 | chr1:169084702-169088166 | Brain_Cingulate_Gyrus | | SE_06194 | chr1:169084609-169087824 | Brain_Hippocampus_Middle | | SE_06812 | chr1:169084660-169086170 | Brain_Hippocampus_Middle_150 | | SE_07884 | chr1:169084478-169091879 | Brain_Inferior_Temporal_Lobe | | SE_23097 | chr1:169085057-169085886 | Colon_Crypt_1 | | SE_23869 | chr1:169085081-169085860 | Colon_Crypt_2 | | SE_24779 | chr1:169084990-169085588 | Colon_Crypt_3 | | SE_26009 | chr1:169084741-169090243 | Duodenum_Smooth_Muscle | | SE_28230 | chr1:169084736-169086677 | Fetal_Intestine | | SE_29071 | chr1:169084724-169086188 | Fetal_Intestine_Large | | SE_31614 | chr1:169084948-169086052 | Gastric | | SE_35493 | chr1:169084753-169087352 | HepG2 | | SE_36829 | chr1:169084714-169086174 | HMEC | | SE_40971 | chr1:169084600-169087206 | Left_Ventricle | | SE_41989 | chr1:169085080-169085826 | LNCaP | | SE_42710 | chr1:169084804-169086187 | Lung | | SE_45292 | chr1:169085211-169085955 | NHLF | | SE_48040 | chr1:169085053-169085619 | Pancreas | | SE_48434 | chr1:169084577-169087172 | Psoas_Muscle | | SE_50499 | chr1:169084819-169085972 | Sigmoid_Colon | | SE_51534 | chr1:169073864-169091965 | Skeletal_Muscle | | SE_52584 | chr1:169084850-169085991 | Small_Intestine | | SE_58956 | chr1:169059341-169133232 | Ly3 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I169115 | chr1 | 169084565 | 169087205 |
|
Enhancer Sequence | CTTTCCATGG AAATGTTTAA GAGACATTTG GGAAACATGT TTTTAAAAAT TTTAAAGTGA 60
ATTTAAATGG CATTGTATTT GTTGTGCAGT CTCTCCCTTT AACAAACCCA TGCTTGTTGG 120
GTTAGCGCCT GCCAAGCTTT TCTCCAGAGG AGACCCCCTT AGGCAGTCCT GCAGTGCTGC 180
TCTGCAGCAT CGCTTCTCAT CTGTTGATGC AGTTGGATCT GGGGAGAGAC GCAGCAATTA 240
GCTATGCTGG AGAGGGCTGA GCAGGCACAG GCACGCACAC CCACGTGCAT GCCCACGGAC 300
ATGCAAGCGT GCACACACAC GCATGCTCAT GGATATACAC ACACACTCAG GCTACCAAGC 360
CCTGGCCCTG ATTTGACCCT GCTTGCCTTG CTGCCTGCCC AGTGGTGTAA TGGAAAAGTC 420
TCTTCTTCAC ATCCGCCATT GCCCTTCCCC CACCTCAGGC TCACTTAGCA ACAGTGGAGT 480
GAAATGAAGG TCACTGTGTG TCAATCGGTG GGTCCGGGAG ATTCCCAGCT GGCTTGCTTC 540
CTGGTAGGCA GGTATGAATG TATGCTGCTG TTCTCTCTTT TAAGGTTGTG GGTGGCTGTT 600
TGTTTAGCTC TGAAGTATAG ACGGCTCAGT GCTAGCAGAC ACATTTTCAA AGGGTCATAT 660
TCTTGGCTTG TTGGTAATCA GAATCGGGCA GGAGAAGTGG GGTGGATGCA GACCAGCTGA 720
CCACACTGGC ACCACCAGCA GTTTCAGTTT CATCTTGATT GTAAAGAGGA AATATCTAAT 780
CTTAAAACTC ATTAGGGGCC TGGCGCAGTG GCTCATACCT GTATTCCCAG CACTTTGGGA 840
GGCCGAGGCA GGCAGATCAC CCGAGGTCAG GATTTTGAGA CCAGCCTGGC CAACATGGTG 900
AAACCCCATC TCTACTAAAA ATACAAAACT TAGCTAGGCG TGATGGCAGG CACCTCTAAT 960
CCCAGTTACT TGGGAGGCTG AGGCAGGAGA ATCACTTGAA CCCGGAAGGC AGACGTTGCA 1020
GTGAGCCAAG ATCGTGCCAC TGCACTCCAG CCTGGGCAAC 1060
|
